Gene Information

Name : CYB_0738 (CYB_0738)
Accession : YP_476984.1
Strain : Synechococcus sp. JA-2-3B'a(2-13)
Genome accession: NC_007776
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 761607 - 762362 bp
Length : 756 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCTTGAGCAAGATTCCTGGGCAAATCATCGCCGTGGGCCGGTCGGATCCCTGGAGCGCCCAGCCGAGGCCTTGGCTGC
GGCCAGCCCGCCCGTAGTGCAGATGGTTGGGGTGAACAAAGTCTATCCACTGCCGGAGGGCAGTTTTCAGGCCCTCTACG
ATATCGACTTGGCGATCCAGCCGGGAGAGTATTGCGCCATTATGGGGCCCTCTGGATCCGGCAAATCCACCCTGATGAAC
CTCATCGGCTGCTTGGATCGGCCCAGCTCAGGGCGCTACTGGCTGGATGGGGTGGAAGTTTCCACCCTGACCGATCGCGA
TTTGGCCCACATTCGCAACCAAAAAATCGGCTTTGTCTTCCAGCAGTTCCATCTCCTGCCCGTCCTGACAGCGCTGGAGA
ACGTCATGCTGCCCTTGGCCTATGCTGGGATCCCGGAGCCGGAGCAACGCCGGCGGGCCAAGCAAGCCCTAGAACAAGTG
GGCTTGGGGAGCAAACTGCAGCAACGTCCGGCCCAACTCTCCGGCGGCCAGCAGCAGCGGGTGGCGATTGCTCGTGCCAT
TGTCAACCGACCCCAACTGTTGCTGGCTGATGAGCCGACTGGGGCTCTGGATAGCCATACCGGCCAGGAAGTGCTGAACC
TTTTTGCGGAGCTCCACCGGCAGGGCATCACCCTGGTCGTGGTCACCCATGACCTTGAAGTAGCCCAGGCCGCCCAGCGC
ATTATCCGGGTTGGGGATGGCCGTTTGCTGGATTGA

Protein sequence : 
MLEQDSWANHRRGPVGSLERPAEALAAASPPVVQMVGVNKVYPLPEGSFQALYDIDLAIQPGEYCAIMGPSGSGKSTLMN
LIGCLDRPSSGRYWLDGVEVSTLTDRDLAHIRNQKIGFVFQQFHLLPVLTALENVMLPLAYAGIPEPEQRRRAKQALEQV
GLGSKLQQRPAQLSGGQQQRVAIARAIVNRPQLLLADEPTGALDSHTGQEVLNLFAELHRQGITLVVVTHDLEVAQAAQR
IIRVGDGRLLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-32 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYB_0738 YP_476984.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-52 52
CYB_0738 YP_476984.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-52 51
CYB_0738 YP_476984.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-40 44
CYB_0738 YP_476984.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 5e-32 43
CYB_0738 YP_476984.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 1e-34 41