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Name : ntrD (CYB_0038) Accession : YP_476302.1 Strain : Synechococcus sp. JA-2-3B'a(2-13) Genome accession: NC_007776 Putative virulence/resistance : Unknown Product : nitrate ABC transporter ATP-binding protein NtrD Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1116 EC number : - Position : 48231 - 49073 bp Length : 843 bp Strand : + Note : identified by similarity to SP:P38046; match to protein family HMM PF00005; match to protein family HMM TIGR01184 DNA sequence : ATGACCAGTTCTCGCCTATCTTCCTCACCGCTATCTTCTGCATCTCCGGTTGCAGGACTGCCCCTTCTTTGTCTTCAGAA TGTGGGCAAGACCTACTTCACCTCAGCAGGGCCCTTCGTTGCGCTGGAAAATATCAATCTGGAAGTGGCCGCCGGTGAGT TTGTTTGCATTATCGGCCACTCGGGTTGTGGCAAATCCACCTTGATCAACATGGTGGCGGGTTTTTCGACTCCCACTTCG GGATCCATCGCCCTCAAGGGCCAGCCCATCACCTCCCCAGGGCCAGATCGGATGATGGTGTTTCAACATTATTCCCTTTT GCCCTGGCTGACTGCCTTTGAAAATATTTATCTGGTGGTGGATCAGGTTTACCCAAACAAATCCCGGCGGGAGAAAAGGG AAATCGTTGAAGAACACCTAGAATTGGTAGGTTTAGCAGAGGCAGCCCACAAGCGGCCCAAGCAGCTTTCTGGAGGCATG AAGCAAAGGGTAGCCATTGCCCGTGCTCTTGCCGTTCGTCCGCAAGTTTTGCTCTTGGATGAGCCTTTTGGGGCCTTGGA TGCCATTACCAAGGAAGATCTACAAGATGAGCTGCTGGCCATTTGGCGGGATCACCGCTGCACAGTTTTGATGATTACCC ACGACATCGACGAGGCTCTCTACTTGTCAGACCGTGTGGTGATGATGACCAACGGCCCCGCTGCCCATATTGGTGAGATC TTGACCATTCCCTTTGAGCGACCGCGCATCCGCTCCCGCATTATGGAAATGCCTGAGTTCTACGAATTGCGTAACCGCGC CCTTGACTTCCTCTATCGCCGCTTTGCCCATGGAGGGGATTGA Protein sequence : MTSSRLSSSPLSSASPVAGLPLLCLQNVGKTYFTSAGPFVALENINLEVAAGEFVCIIGHSGCGKSTLINMVAGFSTPTS GSIALKGQPITSPGPDRMMVFQHYSLLPWLTAFENIYLVVDQVYPNKSRREKREIVEEHLELVGLAEAAHKRPKQLSGGM KQRVAIARALAVRPQVLLLDEPFGALDAITKEDLQDELLAIWRDHRCTVLMITHDIDEALYLSDRVVMMTNGPAAHIGEI LTIPFERPRIRSRIMEMPEFYELRNRALDFLYRRFAHGGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABA47263.1 | ABC transporter | Not tested | S-PAI | Protein | 8e-40 | 41 |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 5e-23 | 41 |
