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Name : thiC (CYB_0278) Accession : YP_476539.1 Strain : Synechococcus sp. JA-2-3B'a(2-13) Genome accession: NC_007776 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 292778 - 294145 bp Length : 1368 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGCGCAGCGAATGGGTTGCCCGTCGCCGTGGGCAAGCAAATGTAACGCAGATGCACTTTGCCCGTCAGGGCGTGATTAC CGAAGAGATGGAGTATGTGGCCCAGCGGGAAAACCTGCCGCCTGAACTGATCCGCTCGGAAGTGGCCCGGGGTCGCATGA TCATCCCTGCCAACATCAATCACACCAACCTCGAGCCGATGTGCATTGGGATCGCTTCCCGGTGCAAAGTCAATGCCAAC ATTGGCGCTTCCCCTACTTCTTCCGGCTTGGCCGAAGAGCTGGAAAAGCTGAAATTGGCCATCAAATACGGCGCCGATAC CGTTATGGATCTGTCCACCGGCGGGGGCGATTTGGATGAAATTCGCACAGCCATTATCCAAGCTTCTCCAGTGCCCATTG GCACGGTGCCCATCTACCAAGCCCTAGAAAGTGTGCACGGCAAGGTCGAAAAACTTTCTGCAGAAGACATCTTGCATGTT ATCGAAAAACAGGCCCAGCAGGGGGTGGACTACATGACCATCCATGCCGGGATCCTGATCGAATATCTTCCGTTGGTACG CCACCGCCTGACGGGAATTGTTTCTCGTGGGGGTGGGATCCTGGCCCGTTGGATGTTGGCCCACCACAAACAAAACCCGC TTTATACCCACTTCCGCGACATTATCGAGATTTTCAAGAAATACGATGTTTCTTTTAGTCTGGGAGATTCTTTGCGACCG GGATGTTTGCACGATGCCTCTGATGAAGCACAACTGGCGGAGTTGAAAACCCTGGGCCAGTTGACCCGCATGGCTTGGGA GCACGATGTGCAGGTGATGGTGGAAGGGCCGGGGCATGTGCCGATGGATCAAATTGAATTCAACGTGCGCAAGCAAATGG AAGAGTGCGATGAGGCTCCCTTCTATGTTTTGGGACCTCTGGTAACCGATATTGCGGCAGGCTATGACCACATCAGCTCC GCCATTGGAGCAGCCTTAGCCGGTTGGTACGGGGCAGCCATGCTTTGCTATGTCACCCCCAAAGAGCACCTGGGTTTGCC CAATGCAGAGGACGTGCGCAACGGCTTAATTGCCTATAAAATTGCCGCCCATGCTGCCGATATTGCCCGTCATCGCCCCG GTGCCAGGGATCGCGATGATGAGATGTCGAGGGCCCGCTATAACTTCGACTGGAACCGGCAGTTTGAATTGTCTTTGGAT CCAGAACGCGCCAGAGAATATCACGACGAAACCTTGCCGGCAGATATCTACAAAACGGCAGAGTTCTGCTCCATGTGTGG GCCAAAGTTTTGCCCCATGCAAACCAAAATGGATGCAGAGGCTTTGAGTGAGCTGGAGCAGTTCTTGGCCGCGCAGCCAA CAGGGTAA Protein sequence : MRSEWVARRRGQANVTQMHFARQGVITEEMEYVAQRENLPPELIRSEVARGRMIIPANINHTNLEPMCIGIASRCKVNAN IGASPTSSGLAEELEKLKLAIKYGADTVMDLSTGGGDLDEIRTAIIQASPVPIGTVPIYQALESVHGKVEKLSAEDILHV IEKQAQQGVDYMTIHAGILIEYLPLVRHRLTGIVSRGGGILARWMLAHHKQNPLYTHFRDIIEIFKKYDVSFSLGDSLRP GCLHDASDEAQLAELKTLGQLTRMAWEHDVQVMVEGPGHVPMDQIEFNVRKQMEECDEAPFYVLGPLVTDIAAGYDHISS AIGAALAGWYGAAMLCYVTPKEHLGLPNAEDVRNGLIAYKIAAHAADIARHRPGARDRDDEMSRARYNFDWNRQFELSLD PERAREYHDETLPADIYKTAEFCSMCGPKFCPMQTKMDAEALSELEQFLAAQPTG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 7e-122 | 62 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 7e-122 | 62 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 6e-118 | 57 |
