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Name : mutS (CYB_2731) Accession : YP_478919.1 Strain : Synechococcus sp. JA-2-3B'a(2-13) Genome accession: NC_007776 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 2823703 - 2826357 bp Length : 2655 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : GTGGATCCCGCCCTGCTCACCCCCATGATGCAGCACTATGTGGAGCTGAAGCGGCAGTATCCCCACGCCATCTTGCTCTA CCGCCTGGGGGATTTCTACGAGATGTTCTTCCAGGACGCCCAGCGGGTGTCGCGGGAGCTGGAGCTGGTGCTCACCGGGC GGGAAGCAGGGGCCATAGGGCGGGTGCCCATGTGCGGGATCCCTTACCATGCTTTCGACCGCTACGCTGCCCAGTTGGTG GCCAAAGGCTATGCCCTGGCCGTCTGCGACCAGATGGAGCCGGCAGATCAGGCCAAGGGCTTGGTGCGGCGGGAAGTGAC GCGGGTGATCACCCCTGGCACCGTCCTCGAAGAGGAGCTGCTGCAGGCGCGGCAAAACAACTACCTGGCAGCCGTCGTGC GGCTCAAAGGATCGAAGCAGGCTCCCTGCCGCTGGGGCCTAGCCTATGCGGATATCTCCACCGGCGAGTTCTGGGTGTGT CAGAGCGAGGGGCAAGAGCAACTGGAGCAGGAACTGGCCCGGCTGCAGCCGGCAGAGGTTTTGCTGCCCACCGAGGAGGG GCTGGGACTAGGCCTCATCCGTCCAGGGGATCCCCAGAAGCCCCTGGGTCTCCCCAACCAATACGCCTATACCCTGCGCC CAGCCGAACCTTTTGAACTGGCGGTGGCGCGGGAGAACCTCATGCAAACCTACGGCCTGCGCTCTCTGGAAGGATTGGGC TGTGAGGGATTGCCTCTGGCGGTGCGAGCAGCGGGAGGGCTTTTGCACTACTTAGAAGAAACCCATTCGCCTCAGCGGTG CGTAGCACCAAAGACCCTGCTGCAGCCTTCTCCCCAGGGAGGCCACCCGCTCCTGCCTCCCCCGCGCACCTACCAGCTCA CGGACTACCTCATCTTGGATGCCCAAACCCGGCGTAACTTGGAGCTCACCCAGACCATCCGAGAGGGGGCTTTTGTGGGA TCCCTGCTCTGGGTGCTGGATCACAGCCGTACAGCCATGGGGGGGCGCACTTTGCGGCGCTGGTTGCTGCAGCCTTTGCG GGATTCGGAGCAAATTCGCCTTCGCCAAGACACCATCCAGGAGCTCTTGGAAAACCCCTCCCTACGGGCCCGCCTGGGAT CCCTCCTGGACTCTCTGTACGACCTGGAGCGGCTGGCCAACCGCGTCGGATCGGGCACCGCCAACCCGCGCGAGCTGGTG GCCTTGGGATCCTCCTTGGGCAAACTGCCCCAGTTGGCCGAGCTGGTGGGGGAAGCCAAGACTCCCCTCTTGCAAAGCCT GCAACAGGTGGATCCCGCCCTGGTGGATCTGGGCCGCCGCATTGAGCACACCCTCTTGCCCTCGCCCCCGCCCATCCTTA CCGAAGGGGGTCTGATCCGGCCCGGCGTGGATCCCGAGCTGGACAGGCTGCGGCAGCAGGTGGAGCAAGACCGCCAGTGG GTTGCCCAGTTGGAAAAAAGCGAGCGCGACCGCACTGGGATCCCCACTCTCAAGGTGGGCTTCAACAAGGCCTTCGGCTA CTACCTCAGCATCAGCCGCGCCAAGGCCCACCAAGTCCCCAAAGAGTACATCCGCAAGCAAACCCTGACCAACGAAGAGC GGTTCATTACCCCCGAGCTGAAAGAAAAAGAGGCCCGCATCCTCACCGCCCAAACCGACATCAACCAGCGGGAATACGAG CTGTTTGTGCAGTTGCGCCAAGAGGCAGGATCCCGGGCCGAAGCCATCCGCCAAGTGGCCCAGACCCTGGCTGCCGTCGA TGCTCTGTTTGGCCTGGCGGAAGTGGCAGTGCAGCAGGGATACACCCGTCCCCTCCTCACAACAGACCGCCGGCTGATCA TCGAGGAGGGTCGCCACCCGGTGGTGGAAAAATCCCTGCCTCAGGGCCTCTTCGTGCCCAATTCGGTGCAACTGGGATCC CCCCACGGCCCCGATTTGATCGTCCTCACCGGGCCCAACATGTCCGGCAAGTCCACTTACCTGCGGCAAATTGGGCTCAT CCAAATCCTGGCCCAGATGGGCAGCTTTGTCCCCGCGCGGCGGGCAGAGTTGGGCCTCTGCGACCGCGTATTTACCCGCA TTGGCGCTGTGGACGATCTGGCTACCGGCCAGTCCACCTTCATGGTGGAAATGAACGAGACCGCCAACATCCTCAACCAC GCCGGCGAGCGCTCCTTGGTGCTGCTGGACGAGATTGGCCGAGGCACCGCTACCTTCGATGGCCTTTCCATTGCCTGGGC GGTGGCGGAATACCTGGCCACTCAGGTGCGCGCCCGTACGGTCTTTGCCACCCACTACCACGAGCTCAACCAACTGGAGA CCCTGCTGCCCAACGTGGCCAACTTTCAGGTGGTGGTCAAGGAATTGCAAGATCGCATCATCTTCTTGCACCAGGTACAG CCGGGGGGGGCAGATCGCTCCTATGGCATCGAGGTGGGACGCATGGCTGGCCTGCCGCAGCCGGTAATCCAGCGGGCCGA ACAGGTGCTGGCCTTGGTGGAAAAACACAGCCGCATCGGCCTGGGCTTGAGAAACCAAGGGAAAAGCCAACCTGCCCAGA AGAACTGCAAAAAAGAGCCCGCTCCCAATCGCAGCCCCGACCCTGCCGTTGGGGATCAACTGTCTTTGATCCCAGCGCCT CTCTTTCCCGATTAG Protein sequence : MDPALLTPMMQHYVELKRQYPHAILLYRLGDFYEMFFQDAQRVSRELELVLTGREAGAIGRVPMCGIPYHAFDRYAAQLV AKGYALAVCDQMEPADQAKGLVRREVTRVITPGTVLEEELLQARQNNYLAAVVRLKGSKQAPCRWGLAYADISTGEFWVC QSEGQEQLEQELARLQPAEVLLPTEEGLGLGLIRPGDPQKPLGLPNQYAYTLRPAEPFELAVARENLMQTYGLRSLEGLG CEGLPLAVRAAGGLLHYLEETHSPQRCVAPKTLLQPSPQGGHPLLPPPRTYQLTDYLILDAQTRRNLELTQTIREGAFVG SLLWVLDHSRTAMGGRTLRRWLLQPLRDSEQIRLRQDTIQELLENPSLRARLGSLLDSLYDLERLANRVGSGTANPRELV ALGSSLGKLPQLAELVGEAKTPLLQSLQQVDPALVDLGRRIEHTLLPSPPPILTEGGLIRPGVDPELDRLRQQVEQDRQW VAQLEKSERDRTGIPTLKVGFNKAFGYYLSISRAKAHQVPKEYIRKQTLTNEERFITPELKEKEARILTAQTDINQREYE LFVQLRQEAGSRAEAIRQVAQTLAAVDALFGLAEVAVQQGYTRPLLTTDRRLIIEEGRHPVVEKSLPQGLFVPNSVQLGS PHGPDLIVLTGPNMSGKSTYLRQIGLIQILAQMGSFVPARRAELGLCDRVFTRIGAVDDLATGQSTFMVEMNETANILNH AGERSLVLLDEIGRGTATFDGLSIAWAVAEYLATQVRARTVFATHYHELNQLETLLPNVANFQVVVKELQDRIIFLHQVQ PGGADRSYGIEVGRMAGLPQPVIQRAEQVLALVEKHSRIGLGLRNQGKSQPAQKNCKKEPAPNRSPDPAVGDQLSLIPAP LFPD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 7e-93 | 42 |
