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Name : ctaD (CYB_2698) Accession : YP_478886.1 Strain : Synechococcus sp. JA-2-3B'a(2-13) Genome accession: NC_007776 Putative virulence/resistance : Unknown Product : cytochrome c oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 2786310 - 2788016 bp Length : 1707 bp Strand : + Note : identified by similarity to SP:Q06473; match to protein family HMM PF00115 DNA sequence : ATGACCCAGCTGCAAGACAGCCCAAGACTTGTTGCTGCACCGAAGGTTGAACTTGAACTTCCTGCTGAGCCTTGGTGGCG CTTCTTTACCTTCTCCACCGATCACAAGGTCATCGGGATCCAGTACTTGGTGACCACCTTTTTCTTCTACTTGGTGGGAG GGGCGCTGGCGACGGCAGTACGGGCAGAGCTGGCTACTCCAGAGGCCGACTTTCTCGGCTTTGAGCGGTACAACGGTGCC TTTACCCTGCACGCCACGATCATGATCTTTTTGTGGATCGTGCCTGCTTTGGTGGGGGGCTTTGGCAACTACCTGGTACC GCTGATGATCGGGGCGCGGGATATGGCCTTCCCCAAGCTGAATGCAGTGGCCTTTTGGCTGGTTCCGCCCACAGGGATCC TGCTTTTGGCCAGCCTGTTCATAGAGGCTCCGGCTGCCGGCTGGACTTCCTACCCCCCCCTCAGCTTGATCAGCGGCAAG GTGGGGGAAGAACTCTGGATCCTGAGCATTTTGTTGGCAGGAACCTCTTCCATCCTGGCGGCGGTTAACTTCATCACCAC CATTCTGAAGATGCGCATGCCCGGCATGAAGATGGAAGACATGCCGCTGTTTTGCTGGGCCATGCTGGCAGCATCTATTC TTACCCTCATTGCAACACCGGTTTTGGCTGGTGCGTTGATCTTGCTCAGCTTTGACCTGTTGGCGGGTACGGCCTTTTTC AACCCCAGCGGCGGCGGGGATCCGGTGGTGTACCAGCACATGTTCTGGTTCTACTCCCACCCGGCGGTGTACATCATGAT CTTGCCGGTCTTTGGCATGATCTCGGAGATTTTGCCGGTGCATGCCCGCAAGCCCATCTTTGCTTACAAAGCCATTGCCT ATTCCAGCTTGGCCATCTGCTTTTTGGGGTTGATCGTCTGGGCGCACCACATGTTCACCAGCGGCACCCCTGACTGGATG CGGGTGTTCTTCATGATCGCCACCATGGCCATTGCCGTTCCCACTGGGATCAAGGTGTTTAGCTGGCTGGCCACTTTGTG GGGCGGCAAAATCCACTTCCGCTCGGCCATGCTGTTTGGCATGGGTTTTGTCTCGATGTTCGTGATCGGCGGCTTGAGCG GGATTATCCTCGCCTCGGTGCCTCTGGATATCCACGTTCACGACACCTACTTTGTGGTGGCCCACCTACACTACGTGTTG TTTGGCGGCAGCGTCTTTGGGATCTATGCCGGCATCTACCACTGGTTCCCCAAGATGACGGGGCGCATGTTGAATGAGTT TTGGGGGCGGGTACATTTTGTGCTGACCTTCGTCGGCTTCAACATCTGCTTTCTGCCGATGCACAAGCTGGGCCTGATGG GGATGCCCCGCCGGGTGGCCCAGTACGATCCCCAATTTGCCGACCTCAACTGGATCAGCTCGGTGGGGGCCTTTGTTCTG GCCATTTCCACCCTGCCCTTTTTGGTTAACGCCATCTACTCCTGGGTGGCCGGGCCAAAAGCTGGGGATAATCCTTGGCA GGCCCTGACACTGGAGTGGACAACTTCTTCTCCCCCGCCCCATCACAACTTTTATGGGGATCCCATTTTGCTGACCGGCC CCTATGACTACGGTTTGCACAGCAAGGAGACGCTGGACTACTTTGCTGCTCAGTTGCAAACCTTGCGGGAGCTGGCGCTG GCAGAAGCGGAGCCTACTTCTTCTTAG Protein sequence : MTQLQDSPRLVAAPKVELELPAEPWWRFFTFSTDHKVIGIQYLVTTFFFYLVGGALATAVRAELATPEADFLGFERYNGA FTLHATIMIFLWIVPALVGGFGNYLVPLMIGARDMAFPKLNAVAFWLVPPTGILLLASLFIEAPAAGWTSYPPLSLISGK VGEELWILSILLAGTSSILAAVNFITTILKMRMPGMKMEDMPLFCWAMLAASILTLIATPVLAGALILLSFDLLAGTAFF NPSGGGDPVVYQHMFWFYSHPAVYIMILPVFGMISEILPVHARKPIFAYKAIAYSSLAICFLGLIVWAHHMFTSGTPDWM RVFFMIATMAIAVPTGIKVFSWLATLWGGKIHFRSAMLFGMGFVSMFVIGGLSGIILASVPLDIHVHDTYFVVAHLHYVL FGGSVFGIYAGIYHWFPKMTGRMLNEFWGRVHFVLTFVGFNICFLPMHKLGLMGMPRRVAQYDPQFADLNWISSVGAFVL AISTLPFLVNAIYSWVAGPKAGDNPWQALTLEWTTSSPPPHHNFYGDPILLTGPYDYGLHSKETLDYFAAQLQTLRELAL AEAEPTSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 4e-104 | 47 |
