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Name : clpB (CYB_2524) Accession : YP_478720.1 Strain : Synechococcus sp. JA-2-3B'a(2-13) Genome accession: NC_007776 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2623215 - 2625857 bp Length : 2643 bp Strand : - Note : identified by similarity to SP:P53533; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724 DNA sequence : ATGCAGCCCACCAATCCCAACCAATTTACCGAAAAAGCTTGGAGCGCCATTGTCCAATCCCAAGATGTGGCCCGGCGGCA CCAGCAGCAACAGTTGGAAACCGAGCATTTGCTGATCTCCCTTCTGGATCAAGAGGGGGGGCTCACCCAAACCCTCCTGC AACGGGCAGGTATCGATCCAAAGCTGGTGCGGGATAAAGTGGAAAGCTTCATCAACCAGCAGCCCAAGTTGGCGCGGGTG GATCAGCTCTACTTGGGTCGCGGCCTGGAAACCACCCTGGATCGGGCCGAGGAGTTTCGCAAAGAGTACGGCGATGATTT CATCTCGGTGGAGCACTTGTTTTTGGGATCCCTGCAAGATGAGCGGGTGGGCAAGCGGGTCTTGGCACCCCTGGGCCTGA CGGTAGAGCGCCTCAAACCGGTCATCAAAGAGGTGCGAGGCAAACAGCGGGTCACCGACAAAAACCCCGAATCCCGCTAC GAAGCCCTGGAGCGCTATGGCCGCGATCTCACCCAGGCGGCCCGCGAAGGGAAGCTGGACCCGGTGATCGGGCGAGATGA CGAGATCCGCCGCGTCATTCAGGTGCTCTCCCGCCGCACCAAAAACAACCCCGTCCTCATCGGCGAACCCGGCGTGGGGA AAACAGCCATTGTGGAGGGCCTAGCCCAGCGCATCAACCGGGGAGATGTGCCGGAGTCTCTGAAAAACCGGCGAGTCATT GCTCTGGACATGGGCGCTCTCATTGCCGGGGCCAAGTACCGCGGGGAATTTGAAGACCGCCTCAAAGCTGTGCTCAAAGA GGTCACTGAATCCGAAGGCCAGATCATCCTCTTCATCGACGAGTTGCACACCGTTGTCGGCGCCGGGGCCGGCGAAGGGG CCATGGATGCCGGCAACTTGCTCAAACCCATGCTGGCGCGGGGCGAGTTGCGCTGTATCGGCGCCACCACCCTGGATGAA TACCGCAAGCACATCGAAAAAGATGCGGCCCTAGAACGCCGCTTTCAGCCGGTGTACGTGGATCAGCCTTCGGTGGAAGA TACCATCTCCATCCTGCGCGGCCTCAAAGAGCGCTACGAGCTGCACCATGGGGTCAAAATCAGCGACTCCGCCTTGGTGG CGGCAGCGGTGCTCTCCAACCGCTACATCTCCGAGCGCTTCCTGCCCGACAAAGCCATCGACCTGGTGGACGAGGCGGCG GCCAAGCTGAAAATGGAAATCACCTCCAAGCCCGTCGAATTGGATGAAATTGACCGGCGCATCATGCAACTGCAGATGGA GGAGCTCTCCCTGAAAAAAGAAGATGATGCTGCCTCTAGAGATCGCCTCAGCAAAATTGAGCAGGAGCTGGCCAACCTGA CGGAGCGACAACGGGAGTTGAATGCTCGCTGGCAATTTGAAAAAGAGGCTATCGAACGCCTGCAAAGCCTTAAAGCCGAG CGGGACGCCGTCAAGCTTCAAATCGAACAGGCTGAACAAAAATATGACCTCAACCGCGCTGCCGAGCTCAAGTACGGCAA GCTGATGGAATTGGAGCGGCAAATCCAAGAGCAGGAGGCTCACCTGGCCAAGCTGCAGACCAACGGCGAGCCGCTGCTGC GGGAGCAAGTGACTCCTGAAGATATCGCTGAGATCGTCTCCCGCTGGACCGGGATCCCAGTCACCAGCCTGATGGAGTCG GAAAAGCAGAAGCTGCTGCGCCTGGAAGCCCATTTGCACCAGCGGGTGGTGGGCCAAGACGAGGCGGTAGCCGCCGTAGC GGCAGCCATTCGGCGCGCCCGGGCCGGCATGAAGGATCCCAATCGCCCCATCGGCTCTTTCCTGTTCATGGGGCCCACTG GCGTGGGGAAAACCGAGCTGGCCCGTGCTTTGGCGGAGTTCCTCTTCGACACTTCCGAGGCGATGGTGCGCATCGACATG TCCGAGTACATGGAGAAGCACTCGGTCTCTCGTCTAATCGGAGCTCCTCCAGGCTACGTGGGCTACGAAGAAGGCGGGCA GCTCTCCGAGGCGGTGCGGCGACGCCCCTACTCGGTGGTGCTGTTTGACGAGGTGGAAAAAGCCCACCCGGATGTCTTCA ACATCCTGCTGCAGGTGCTGGACGATGGCCGCATCACCGACTCCCAAGGGCGGACAGTGGACTTCAAAAACACCATCATC ATCATGACCAGCAACATCGGCAGCGACCTCATCCTGGAAATTGGGGCCGATGAAAGCCGCTACGAGGAGATGAAAACTCA GGTGCTGGCCATGCTGCGGCACCACTTCCGACCGGAGTTCCTCAACCGGGTGGACGAGCTGATCATCTTCCACGCCCTCA CCAAAGAGCAAATTCGCCAGATTGTCGGCCTGCAAATGCAGCGGGTGGAAAAGCTGCTGGCAGATCAGCAAATCGAGATC CTGCTCACCGAAGAAGCCAAAGACTACCTGGCAGAGGTGGGCTACGACCCCGTGTTCGGGGCCCGTCCGCTGAAGCGGGT GATCCAGCGGGAGATCGAAAACCCCATCGCCACCAAGCTGCTGGAGAACGAGTTCCTGCCCGGCGACCGCATTTTGGTGG ATGTAGCCAACGAGCGGTTGATCTTCCGCAAGATCGGCTCTCAGCCCCGCCAGGAGCCGCCCGCTGCCGTAGCCGTCAGC TAG Protein sequence : MQPTNPNQFTEKAWSAIVQSQDVARRHQQQQLETEHLLISLLDQEGGLTQTLLQRAGIDPKLVRDKVESFINQQPKLARV DQLYLGRGLETTLDRAEEFRKEYGDDFISVEHLFLGSLQDERVGKRVLAPLGLTVERLKPVIKEVRGKQRVTDKNPESRY EALERYGRDLTQAAREGKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRINRGDVPESLKNRRVI ALDMGALIAGAKYRGEFEDRLKAVLKEVTESEGQIILFIDELHTVVGAGAGEGAMDAGNLLKPMLARGELRCIGATTLDE YRKHIEKDAALERRFQPVYVDQPSVEDTISILRGLKERYELHHGVKISDSALVAAAVLSNRYISERFLPDKAIDLVDEAA AKLKMEITSKPVELDEIDRRIMQLQMEELSLKKEDDAASRDRLSKIEQELANLTERQRELNARWQFEKEAIERLQSLKAE RDAVKLQIEQAEQKYDLNRAAELKYGKLMELERQIQEQEAHLAKLQTNGEPLLREQVTPEDIAEIVSRWTGIPVTSLMES EKQKLLRLEAHLHQRVVGQDEAVAAVAAAIRRARAGMKDPNRPIGSFLFMGPTGVGKTELARALAEFLFDTSEAMVRIDM SEYMEKHSVSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTII IMTSNIGSDLILEIGADESRYEEMKTQVLAMLRHHFRPEFLNRVDELIIFHALTKEQIRQIVGLQMQRVEKLLADQQIEI LLTEEAKDYLAEVGYDPVFGARPLKRVIQREIENPIATKLLENEFLPGDRILVDVANERLIFRKIGSQPRQEPPAAVAVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-100 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-98 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-98 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_478720.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 8e-115 | 44 |
| clpB | YP_478720.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 3e-104 | 43 |
