|
Name : ribD (CYB_1847) Accession : YP_478065.1 Strain : Synechococcus sp. JA-2-3B'a(2-13) Genome accession: NC_007776 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 1.1.1.193 Position : 1932557 - 1933669 bp Length : 1113 bp Strand : + Note : identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGATTTCGGATCAGCAGTGGATGGAACGGTGTCTATCCCTGGCCCGTTCCACACCTCAGCGTCCCTCTCCCAATCCGCG GGTGAGTTGCGTGATCGTGCAGGGGGATCGGGTGGTGGGGGAAGGCGTTCATCCGGGGGCAGGGCAGCCCCATGCGGAGG TGTTGGCTCTGCAACAGGCGGGATCCCTGGCCAGAGGGGCAACGCTCTACGTCAACCTGGAGCCCTGCAACCACTATGGG CGCACTCCCCCTTGTACCGAGGCCATCCTAGCTGCCGGGATCCGGCGGGTGGTGGTGGGGATGCAGGATCCCAATCCCTT GGTGGCCGGCAAAGGGATCCGACGCCTGCAGGAGGCGGGGATCGACGTGACGGTGGGAGTGCTGGAGCGGGAGTGCCAGG AGCTGAACGAGGGGTTTGCCTTCGCCATTGTGCGGCAACAGTGTTTCGGCCTGCTGAAATACGCCATGACCCTGGATGGC AAGAGCGCCGCCGCCACCGGCCACAGCCGCTGGATCAGCAACTCTCCGGCGCGGCAGTGGGTACACCAACAGCGGGCCTG GCATGATGCCGTCATCGTTGGATCCCGAACCGTTTGGCAGGATAACCCGCGCCTCACCTGTCGCCTGGCGGAGTTGCAGG GATCCCAGCCGTTGCGGGTGGTCCTCAGCCGTTCCCTGAACCTACCTCCCGTCGCCCATCTGTGGCAGGTGGAAGAAGCG CCGACGTTGGTGATCACAGAAGCTGTGGCAACCCATCCTTTGTGGGGATCCCTGGCCAAGCAGGGGGTGGAGCTGCTGCA TCTGCCCCAAGTAACCCCCTCGCGGGCGGCACAGGTGCTCTTTCAGCGGGGGTGTCTGAGTGCCCTCTGGGAATGCGGGG GCACGCTGGCCTGGGCAGCCCTCAAAGATGGGGCGATCCAGAAAGTAGCCGCCTTCATCGCTCCCAAGATCCTAGGCGGA GCCGCTGCGCCAACCCCGGTAGCAGGGGAGGGGATCCCTGATGTAAACCAGAGCTGGCAACTGGTGGAGCCCCGGCTGGA GACCTTGGGGGATAACTGGTTGATCATCGGAAAGATCTCCTCTTCAGTTGGCCACAGTAGCCTACTAAAGTGA Protein sequence : MISDQQWMERCLSLARSTPQRPSPNPRVSCVIVQGDRVVGEGVHPGAGQPHAEVLALQQAGSLARGATLYVNLEPCNHYG RTPPCTEAILAAGIRRVVVGMQDPNPLVAGKGIRRLQEAGIDVTVGVLERECQELNEGFAFAIVRQQCFGLLKYAMTLDG KSAAATGHSRWISNSPARQWVHQQRAWHDAVIVGSRTVWQDNPRLTCRLAELQGSQPLRVVLSRSLNLPPVAHLWQVEEA PTLVITEAVATHPLWGSLAKQGVELLHLPQVTPSRAAQVLFQRGCLSALWECGGTLAWAALKDGAIQKVAAFIAPKILGG AAAPTPVAGEGIPDVNQSWQLVEPRLETLGDNWLIIGKISSSVGHSSLLK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 1e-44 | 44 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 1e-44 | 44 |
