Gene Information

Name : pyk (CYB_1545)
Accession : YP_477772.1
Strain : Synechococcus sp. JA-2-3B'a(2-13)
Genome accession: NC_007776
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1620132 - 1621991 bp
Length : 1860 bp
Strand : -
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence :
ATGCATTTGAGGGATTCTTTTCGACGCACCAAAATTGTTGCCACCATCGGCCCTGCCAGCTCAAATCCAGCCATTCTCAG
GGAGATGATCCTGCAAGGGGCAACCACCCTTCGCCTCAACTTCTCCCATGGGGATCACGAGCTACACCGCCGCAGCATTC
GCCTGATCCGCCAAACCGCGATGGATCTGGGCATCCAGGTCGCCATTTTGCAAGACCTGCAGGGGCCCAAAATCCGCCTG
GGCAAGTTCGCCGAAGGCTCGATCACCCTCAAGGCAGGGGATCCCTTTGTGTTGACCAGCAAACCTGTCTTGGGATCCCA
AGAGCGCAGTTGGGTCACCTACGACAAGCTGGCCCAAGAAGTGCCCGAAGGAGCGACGATCCTCATCGACGATGGTCGAG
TGGAGATGCGGGTGGAAGCCGTGGATCCGGAAGCGGGCGAACTCTTCTGCCGCACCATTGTCGGGGGTACCCTCTCCAAC
AACAAGGGGGTCAATTTCCCCGGTGTGCGCCTGAGCATCCGCGCCGTGACCCCAAAAGACAAAGAAGATCTCTACTTCGG
CCTCAACCAAGGGGTGGATTGGGTGGCCCTCAGCTTTGTGCGGGATCCCTCTGATGTGCTGGAGCTGCGGGAGCTCATCG
CCTCTGCCAAACGGCCTTCTTCGGGCTCAGCCGACAAGCGGGTACCCATCATCGTCAAGATCGAGAAACACGAGGCCATT
GAACAGCTGCCCCAGATTTTGGCCCTCAGCGACGGTGTGATGGTGGCGCGGGGAGATCTGGGGGTAGAGCTGCCTGCGGA
AGAGGTGCCGATCCTGCAGAAGCGGGTGATCGCCCTGGCCAACTCCCTGGGGATCCCGGTAATTACGGCCACCCAAATGC
TGGACAGCATGGTGCACAGCCCCCGGCCTACCCGTGCCGAAATCTCCGATGTGGCCAACGCCATTTTGGATGGCACCGAT
GCCGTCATGCTCTCCAACGAGACGGCTGTGGGCAAATACCCTGTCGAGGCCGTTGCCACCATGGCCCGCATTGCCGTGCG
CACCGAGCGCGATTACTTTGACCTGACCTACGCCGACCGACGACAACGCCTTCGCGCCCTTGCCATGCAGGAGCTGAGCC
AAAACAACGGCAACAGTCCTGCCGGGATGCGGCCCAAAACCCTGATCACCGACTCGATCAGCCGCGCCGTGGGGGAGATC
GCCCAAGAGTTGGATGCTGTAGCCGTGATGACCCTGACCAAAACAGGGGCTACCGCTCGCAATGTCTCTAAGTTTCGCCC
CCGCACTCCCATCCTAGCCGTAACCCCCCATGTGGAAGTGGCACGGCGGCTGCAGTTGGTTTGGGGGGTACATCCGCTGT
TGGTTATGGATTTGGCCACCACCCGCCAGACCTTTCAAGCGGCCATCAGCTTGGCTCAGGAAGATGGCTTGCTCAAGGAT
GGCGACTTGGTGGTGCTCAGTGCAGGAACCCTGCCAGGCGTTGCGGGATCCACCGATCTGATCAAGGTGGATGTGGTGAA
AGCGGTGGTGGCTCAAGGCAAAGGGTTTGGCAAAGGCATTGTCAGCGGCCCGGCCCGCATCTTGAGATCCAGCCTCGATG
CCAGCAAAATCACCGCCGGAGACATTTTGGTTGCCCAATCCACCGACGCCAACTATGTGGAGGCCATCAAACAGGCAGCC
GGCGTGATTACCGAAGAAGAGGGAGCCTCCTCTCATGCAGCAGTCATTGGCCTGCGGCTGGGGGTGCCGGTGCTGGTGGG
GGTCAAGGATGCTACCCGCTTAATCCGGGATGGATCTATCGTCACTCTGAACCCAGAAAAAGGCATAGTGACCGCAGGAG
CCGATGGCTTGGGCTTTTAA

Protein sequence :
MHLRDSFRRTKIVATIGPASSNPAILREMILQGATTLRLNFSHGDHELHRRSIRLIRQTAMDLGIQVAILQDLQGPKIRL
GKFAEGSITLKAGDPFVLTSKPVLGSQERSWVTYDKLAQEVPEGATILIDDGRVEMRVEAVDPEAGELFCRTIVGGTLSN
NKGVNFPGVRLSIRAVTPKDKEDLYFGLNQGVDWVALSFVRDPSDVLELRELIASAKRPSSGSADKRVPIIVKIEKHEAI
EQLPQILALSDGVMVARGDLGVELPAEEVPILQKRVIALANSLGIPVITATQMLDSMVHSPRPTRAEISDVANAILDGTD
AVMLSNETAVGKYPVEAVATMARIAVRTERDYFDLTYADRRQRLRALAMQELSQNNGNSPAGMRPKTLITDSISRAVGEI
AQELDAVAVMTLTKTGATARNVSKFRPRTPILAVTPHVEVARRLQLVWGVHPLLVMDLATTRQTFQAAISLAQEDGLLKD
GDLVVLSAGTLPGVAGSTDLIKVDVVKAVVAQGKGFGKGIVSGPARILRSSLDASKITAGDILVAQSTDANYVEAIKQAA
GVITEEEGASSHAAVIGLRLGVPVLVGVKDATRLIRDGSIVTLNPEKGIVTAGADGLGF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 1e-78 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 5e-79 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 5e-79 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 9e-79 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_477772.1 pyruvate kinase VFG0479 Protein 2e-79 44