Gene Information

Name : potB (CYB_1299)
Accession : YP_477537.1
Strain : Synechococcus sp. JA-2-3B'a(2-13)
Genome accession: NC_007776
Putative virulence/resistance : Unknown
Product : spermidine/putrescine ABC transporter permease
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1176
EC number : -
Position : 1362410 - 1363360 bp
Length : 951 bp
Strand : -
Note : identified by similarity to SP:P23860; match to protein family HMM PF00528

DNA sequence :
ATGTTGAAGCTGCCATCTCCTGTGGGCAAGTGGATCCCTGGCCAAGCCCAGGTGCGATTTGGGGAGCTGCTCACCCCTTG
GCAGGAGCTGGGACGCAGCCTGATTTTTGCTGGGCCAGGGGTGCTGTGGGTGATGTTTTTTCTGGTGCTGCCGGGGCTGT
TGCTGTTGGTGTGCAGCTTTCTCAGCCGCGGGGAGTTTGGCCAGATTCAACTGCCCCTGACCCTGGAGAACTATCTGCGC
ATTCTCGGCTTTGGCCCCTTGGGATGGACGCCCATCTACTGGCAGATCTTGGGCCGCAGCCTGCTGGTGGCGGGGGTGAC
CACCTTTTTTTGCGTGCTGCTGGCCTACCCATTGGCTTTCTTCATTGCCGCCCACCCACCCCGACAACGGGATCTGTTGC
TCACCTTGGTGGTGGTGCCCTTTTGGACGAACCTGGTGATCCGCACCTACGCCTGGATGGTGGTGCTGGCCCCGGAAGGG
TGGCCGGCTCGCTTGGCGGCCTGGCTGGGCTGGATCCCACCGCAAACGGCTCTGTATCCCAGTTGGCTGGCGGTTTATCT
GGGCATGGTCTACACGTTTTTGCCCTACATGGTCTTGCCCCTGTACACGGCGGTGGAGCGCATCGATTGGCGGCTGGCGG
AAGCGGCACGGGATCTCTATGCCAAGGGTTGGCAGGTCTTTTGGTGGGTGCTTCTGCCCCAGACCTTGCCTGGACTGGCG
GCGGGCCTCATTCTGGTGGGGATCCCGGCTTTCGGCATGTTCGTAGTGCCGGATTTGTTGGGGGGCAGCAAAACGCTGTT
GATCGGGAATGTGATTCAGTTGCAGTTTGGCTCCAGCCTGGACTATCCTTTCGGGGCGGCCCTCAGCTTTTTGGTTACCG
GCCTCACCCTGGGGTTGATCTACGCCTACAGCCGGTATGTTGGCACCCGCAGCCTAGAACATCTGGTTTGA

Protein sequence :
MLKLPSPVGKWIPGQAQVRFGELLTPWQELGRSLIFAGPGVLWVMFFLVLPGLLLLVCSFLSRGEFGQIQLPLTLENYLR
ILGFGPLGWTPIYWQILGRSLLVAGVTTFFCVLLAYPLAFFIAAHPPRQRDLLLTLVVVPFWTNLVIRTYAWMVVLAPEG
WPARLAAWLGWIPPQTALYPSWLAVYLGMVYTFLPYMVLPLYTAVERIDWRLAEAARDLYAKGWQVFWWVLLPQTLPGLA
AGLILVGIPAFGMFVVPDLLGGSKTLLIGNVIQLQFGSSLDYPFGAALSFLVTGLTLGLIYAYSRYVGTRSLEHLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
potB BAA36746.1 - Not tested LIM Protein 2e-36 44