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Name : CYA_0549 (CYA_0549) Accession : YP_474029.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Unknown Product : ISSoc3, orfA transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 563304 - 563780 bp Length : 477 bp Strand : - Note : identified by match to protein family HMM PF01797 DNA sequence : TTGGTCGTCGCTGGGCAGGATCCGGTACTCGTGGGTGAGAATCATGAGACGGTTCTAGCATTTAGCGCAACGAGCTACAA CATAGGCCATCGTTCTGTTTACAGCCTACAAATCCACTTGGTGCTGGTGACAAAGTACCGTCGTCGGGTGATAACTGCTC CAATGTTGCAGAGGCTGGAAGATATATTTCGAGCGACCTGCCAAAAGTGGCGCTGTTCCTTGGTGGAGTTCAACGGTGAG GCGGATTATGTGCATCTGTTGGTGAGTTTTCCGCCGGATGTTCAGGTCTCGAAGCTGGTGAACAACCTGAAAACAGTCTC CAGCCGGTTGATTCGCAAAGAGTTCGCCACAGAGGTGGCACGGTTCTACAGCAAGCCTGTATTTTGGACAGGGGCCTATT TTGTTGCCTCTTGTGGTGGGGTCACCGTTGAGGAGTTGAAGAAGTATGTCGAGCAGCAGGCAACGCCCAGATTGTGA Protein sequence : MVVAGQDPVLVGENHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRVITAPMLQRLEDIFRATCQKWRCSLVEFNGE ADYVHLLVSFPPDVQVSKLVNNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYVEQQATPRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | AAR03856.1 | transposase A-like protien | Not tested | cag PAI | Protein | 5e-27 | 45 |
| tnpB | CAJ31328.1 | insertion sequence IS606 transposase homolog B | Not tested | cag PAI | Protein | 3e-26 | 44 |
