Gene Information

Name : CYA_0513 (CYA_0513)
Accession : YP_473993.1
Strain : Synechococcus sp. JA-3-3Ab
Genome accession: NC_007775
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 532955 - 533377 bp
Length : 423 bp
Strand : +
Note : identified by match to protein family HMM PF00376

DNA sequence : 
ATGTCTGAACTGCTGCGGGTGGGTCAGGTAGCCGAGAAACTGGGCATCACCCCCCAAACCCTCTACTTCTACGAGCGCCT
GGGGCTCATTCCCAAGCCGCGCAGGACGGAGGGGGGCTATCGCCTCTACGGGGAGCCTGAGCTGGAGCGGCTGGCTTTCA
TCGCCCGCGCCAAGGCTTTGGGACTTACCCTAGCCGAGATCAAGGAACTGCTCTTGCTTCAGGAGAATGGGCAGGCTTTG
CCCTGTTGGCAGGTGTACGTAAAGCTAACCGAAAAGCTCAGACAAATCGATAAGTCAATTGCCCATCTGCAGGAACTCAG
AGGGGAGTTGTCAACACTCATTGAAAAGTGTCAACAAAAATTTTCTGAGCAAGAGAAAAGCTCTTCTTGCGCCATCTTTC
AACAACAGCTTGATAACTCATGA

Protein sequence : 
MSELLRVGQVAEKLGITPQTLYFYERLGLIPKPRRTEGGYRLYGEPELERLAFIARAKALGLTLAEIKELLLLQENGQAL
PCWQVYVKLTEKLRQIDKSIAHLQELRGELSTLIEKCQQKFSEQEKSSSCAIFQQQLDNS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-12 44
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 2e-12 44
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 1e-12 44
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 2e-12 44
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 2e-12 44
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 2e-12 44
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 2e-12 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYA_0513 YP_473993.1 MerR family transcriptional regulator BAC0682 Protein 8e-12 42