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Name : rph (CYA_2643) Accession : YP_476018.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 2658593 - 2659321 bp Length : 729 bp Strand : + Note : identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966 DNA sequence : ATGAGCTGGCAACGCCCCGATGGTCGCACGGCTGCCCAATTGCGCCCGATTTCCTTTCAGCGCCACTTCACCCGCTACGC TCCGGGCTCAGTGCTGGTGAAGTTTGGCGATACCCATGTCCTCTGCACCGCCAGTGTGGCCGAAGAAGTCCCCCCCTTTT TGCAGAACACCGGCCAAGGCTGGCTGACAGCGGAGTACCGCATGCTGCCCACCGCCACCCAACAGCGCCAGCCGCGAGAG ACGCTAAAAGTCTCAGGCCGCACCGCCGAGATCCAACGGCTCATCGGGCGTAGCCTGCGCGCCGCCTTGGATTTCCACAA GCTGGGATCCCGCACCATCACTGTCGATGCCGACGTCCTGCAGGCCGATGGCAGCACGCGCACCGCCGCCATCACCGGTG GCTATGTGGCCCTGCACGACGCCATCACTTGGCTTTACAAACAGGGGCTGCTGGATCCGGCGCAGGGATCCCCCTTGCGG CAGCAGGTGGCAGCCCTTTCGGTGGGGATCGTGCGAGGCGAGGTGCTGGTGGATTTGTGCTACGAGGAGGACAGCCAAGC GGAAGTGGACATGAACATTGTCATGAACGAGCAGGGAGCCTTGATCGAGATTCAGGGCACCGCCGAAGCCGGCTGCTTCG ACCGCTCGCAACTGTTGCAAATGTTGGATATGGCCCAGGCCGGCATCCAAGAATTGCTCCGGGCCCAGCGAGAGACTCTA AACTTGTAG Protein sequence : MSWQRPDGRTAAQLRPISFQRHFTRYAPGSVLVKFGDTHVLCTASVAEEVPPFLQNTGQGWLTAEYRMLPTATQQRQPRE TLKVSGRTAEIQRLIGRSLRAALDFHKLGSRTITVDADVLQADGSTRTAAITGGYVALHDAITWLYKQGLLDPAQGSPLR QQVAALSVGIVRGEVLVDLCYEEDSQAEVDMNIVMNEQGALIEIQGTAEAGCFDRSQLLQMLDMAQAGIQELLRAQRETL NL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 2e-60 | 58 |
