Gene Information

Name : hemC (CYA_0243)
Accession : YP_473730.1
Strain : Synechococcus sp. JA-3-3Ab
Genome accession: NC_007775
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 246676 - 247608 bp
Length : 933 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
GTGCGGATCGCCTCCCGCAAAAGTGAGCTGGCCTTGGCCCAGACCTACTGGGTAATGGGACAGTTGCAGGCCCACCATCC
AGGATTGCCGCTAGAGCTGCACACCCTTTCCACCCAGGGAGACATCATCCTGGATGTGGCGCTGGCCAAAATTGGCGATA
AGGGCCTGTTTACCAAGGAGCTGGAGGTCAGCCTGCTCAACGGCAGCAGCGATCTAGCGGTGCACAGCCTTAAGGATCTG
CCCACCCGTTTGCCGGAAGGCCTGGTCCTGGGGGCGATTACGCAGAGGGAGGATCCTTTGGACGCGCTGGTGCTGCGGGA
AGAGCTGCGCGGCTACCAACTGGCCACCCTGCCAGCAGGAACGGTGATCGGCACTTCATCTTTGCGGCGATTGGCCCAAC
TGCGCCACGCCTTTCCCCACCTGCAATTTAAGAATGTGCGGGGCAACCTCAACACTCGCTTGGCCAAGCTGGATCGGGGG
GAGTACGACGGCCTAATTTTGGCGGTGGCGGGGCTGAAGCGCCTGGGCCAAGAACAGCGGATCCACGAGGTGCTGGATCC
CAGTGTGTCTCTGTACGCGGTTGGCCAGGGATCCCTGGGGATCGAGTGCCGGCAGGGGGATGAGCGGATTCTGGAGCTCA
TCCGACCCTTAGCCGATGCGGAGGCCACAGCCCGCTGTTTGGCCGAGCGAGCTTTCCTGCGGGCCTTGGAGGGGGGGTGT
CAGGTGCCCATCGGCGTCCACAGCCAAGTCCAGGGGGAAGAGCTGCACCTGACCGGCATGGTGGCCGACCTGGAGGGGCG
ACAGCTCATCCGCGATACCCAGACGGGATCCACCGCCGATCCCGAGGCAGTGGGGATGGCTCTTGCAGAAAAGCTAAAAC
GGCAGGGGGCCGACGAGATTTTGCAGGCCATTTTTGCCCAGGCCCGCCGTTAG

Protein sequence :
MRIASRKSELALAQTYWVMGQLQAHHPGLPLELHTLSTQGDIILDVALAKIGDKGLFTKELEVSLLNGSSDLAVHSLKDL
PTRLPEGLVLGAITQREDPLDALVLREELRGYQLATLPAGTVIGTSSLRRLAQLRHAFPHLQFKNVRGNLNTRLAKLDRG
EYDGLILAVAGLKRLGQEQRIHEVLDPSVSLYAVGQGSLGIECRQGDERILELIRPLADAEATARCLAERAFLRALEGGC
QVPIGVHSQVQGEELHLTGMVADLEGRQLIRDTQTGSTADPEAVGMALAEKLKRQGADEILQAIFAQARR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 2e-65 51
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 2e-65 51