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Name : mutS (CYA_2035) Accession : YP_475438.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 2052972 - 2055620 bp Length : 2649 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : GTGGATCCCGCCCTGCTCACCCCCATGATGCAGCACTACGTGGAGCTGAAGCGGCAATACCCGCACGCCATTCTGCTCTA CCGCCTGGGGGATTTCTACGAGATGTTTTTCCAGGACGCGCAACTGGTGTCGCGGGAGCTGGAGCTGGTGCTCACCGGGC GAGAGGCAGGGGCCATTGGCCGGGTGCCCATGTGCGGGATCCCTTACCACGCCTTCGACCGCTATGCCGCCCAGTTGGTG GCCAAAGGCTACGCCCTGGCCGTCTGCGACCAGATGGAGCCGGCGGATCAAGCCAAAGGCCTGGTGCGGCGGGAAGTGAC GCGGGTGATCACACCCGGCACCGTCATCGAAGAGGAGCTGCTGCAGGCGCGGCAAAATAACTACCTGGCGGCCATTGTCC GCCTGAGAGGCTCCAAGCAAACGGTCTGGGGCCTGGCCTATGCCGACATTTCCACCGGCGAGTTCTGGGTCTGCCAGGGC GAGGGGCAAGAGCAGCTAGAACAGGAGCTGGCGCGGCTGCAGCCGGCGGAGATCCTGCTGCCCACCGAAGAGGGGCTGGG CCTGGGCCTGATGCGGCCCGGGGATCCCCAAGCCCCCCTGGGCCTGCCCGGCCAGTACACCTATACCCTGCGGCCAGCCG AACCCTTTGAGCTGGCCACGGCGCGGGAAAACCTGCTGCAGACCTACGGCCTGCGCTCCTTGGAGGGCTTGGGCTGCGAG GGGCTGCCCCTGGCCATTCGGGCGGCGGGAGGATTGCTCCACTACCTGGAAGAAACTCAAAAAAACCTGGTGCAGCCTTC CCCTCAGGGGGGCCATCCGCTCCTGCGCCCGCCTCGCACCTACCAGCTCACCGACTACCTGATATTGGACACCCAAACCC GTCGCAACCTGGAGCTGACCCAGACCATCCGCGAGGGGGCCTTTGTCGGATCCCTGCTCTGGGTGCTGGATCGCAGCCGC ACCGCCATGGGGGGACGCACCCTACGCCGCTGGCTGTTGCAGCCTTTGCGAGATCCAGAGCAAATCCGCCTCCGCCAAGA CACCATCCAGGAGCTCTTGGAAAGCCCCTCCCTGCGCACCCGCCTGGGATCCCTGCTGGACTCTCTCTACGACCTGGAGC GGCTGGCCAACCGCGTCGCCTCCGGCACCGCCAACCCGCGCGAGCTGGTGGCCCTGGGATCCTCTTTGGGCAAACTGCCC CAGTTGGCCGAGCTGGTGGCCGAAGCCCAAACCCCCCTCCTGCAGAGCCTACAACAGGTGGATCCCGCTCTGGTTGACCT GGGCCACCGCATCGAGCACACCCTCCTGCCCTCGCCGCCCCCTGTGCTCACCGAAGGGGGGTTGATCCGGCCTGGGGTAG ATGCCGAGCTGGACAGGCTGCGGCAGCAGGTGGAGCAAGACCGCCACTGGATTGCCCAGTTGGAGAAAACCGAGCGCGAG CGCACCGGCATCCCCACCCTCAAAGTGGGCTTCAACAAGGCCTTTGGCTATTACCTCAGCATCAGCCGCGCCAAGGCCCA GCAGGTGCCCAAGGAGTACATCCGCAAGCAGACGCTAACCAACGAAGAGCGCTTCATCACCCCTGAGCTCAAAGAAAAAG AGGCCCGCATCCTCACCGCCCAAACCGAGATCAACCAGCGGGAGTACGAGCTGTTTGTACAACTGCGCCAGGAGGCGGGA TCCCAAGCTGCCGCCATCCGCCAGGTGGCCCAGACCCTGGCTGCTGTCGATGCTCTCTTTGGCCTGGCCGAGGTGGCCGT GCAGCAGGGCTACACCCGTCCCGTGATCACCGCCGATCGCCGCCTGATCATCGAAGAGGGGCGCCACCCCGTGGTGGAGA AATCGTTGCCCCAGGGCCTATTTGTCCCCAACTCGGTGCGCCTGGGATCCCCCCACGGCCCGGATCTCATCGTCCTCACC GGCCCCAACATGTCCGGCAAGTCCACCTACTTGCGGCAGATTGGGCTGATCCAGATCCTGGCCCAGATGGGCAGCTTTGT CCCGGCGCGGCGGGCGGAGCTGGGCCTGTGCGACCGCGTGTTTACCCGCATCGGCGCCGTCGATGACCTGGCCACGGGAC AGTCCACCTTCATGGTGGAGATGAACGAGACGGCCAACATCCTCAACCACGCCGGCGAGCGCTCCCTGGTGCTTCTGGAC GAGATTGGCCGCGGCACCGCCACCTTCGACGGCCTTTCTATCGCCTGGGCCGTAGCCGAGTACCTGGCCACCCAGGTGCG CGCCCGCACGATCTTTGCCACCCACTACCACGAGCTCAACCAACTGGAAACCCTGCTGCCCAACGTGGCCAACTTCCAGG TGGTGGTCAAAGAGCTCCGGGATCGCATCATCTTTTTGCACCAGGTGCAACCTGGCGGAGCCGACCGCTCCTACGGCATC GAGGTGGGGCGCATGGCCGGCCTGCCCCAGCCGGTGATCGAGCGGGCCAAACAGGTGCTGGCCCTGGTGGAACAACACAG CCGCATCGGCCTCGGCCTGCGCAGCCAGGGGAAAAGCCGCCCTTCTTCAAACAACCCCAAGAAACGGTTCAAGCAAGAAT CCAATTCCCGCGGGATACCCGACTGCGATGCCAAGGCTGGGGATCAACTATCCCTGATCCCGACCTCCCTCTACCCCGAG GAGCTCTAG Protein sequence : MDPALLTPMMQHYVELKRQYPHAILLYRLGDFYEMFFQDAQLVSRELELVLTGREAGAIGRVPMCGIPYHAFDRYAAQLV AKGYALAVCDQMEPADQAKGLVRREVTRVITPGTVIEEELLQARQNNYLAAIVRLRGSKQTVWGLAYADISTGEFWVCQG EGQEQLEQELARLQPAEILLPTEEGLGLGLMRPGDPQAPLGLPGQYTYTLRPAEPFELATARENLLQTYGLRSLEGLGCE GLPLAIRAAGGLLHYLEETQKNLVQPSPQGGHPLLRPPRTYQLTDYLILDTQTRRNLELTQTIREGAFVGSLLWVLDRSR TAMGGRTLRRWLLQPLRDPEQIRLRQDTIQELLESPSLRTRLGSLLDSLYDLERLANRVASGTANPRELVALGSSLGKLP QLAELVAEAQTPLLQSLQQVDPALVDLGHRIEHTLLPSPPPVLTEGGLIRPGVDAELDRLRQQVEQDRHWIAQLEKTERE RTGIPTLKVGFNKAFGYYLSISRAKAQQVPKEYIRKQTLTNEERFITPELKEKEARILTAQTEINQREYELFVQLRQEAG SQAAAIRQVAQTLAAVDALFGLAEVAVQQGYTRPVITADRRLIIEEGRHPVVEKSLPQGLFVPNSVRLGSPHGPDLIVLT GPNMSGKSTYLRQIGLIQILAQMGSFVPARRAELGLCDRVFTRIGAVDDLATGQSTFMVEMNETANILNHAGERSLVLLD EIGRGTATFDGLSIAWAVAEYLATQVRARTIFATHYHELNQLETLLPNVANFQVVVKELRDRIIFLHQVQPGGADRSYGI EVGRMAGLPQPVIERAKQVLALVEQHSRIGLGLRSQGKSRPSSNNPKKRFKQESNSRGIPDCDAKAGDQLSLIPTSLYPE EL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 1e-123 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mutS | YP_475438.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 1e-135 | 43 |
