Gene Information

Name : CYA_2032 (CYA_2032)
Accession : YP_475435.1
Strain : Synechococcus sp. JA-3-3Ab
Genome accession: NC_007775
Putative virulence/resistance : Virulence
Product : iron chelate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2049166 - 2050011 bp
Length : 846 bp
Strand : -
Note : identified by similarity to SP:P15031; match to protein family HMM PF00005

DNA sequence : 
ATGAGGGAGGGCCGGCCAATTTTGCAGGCCGAGGGGCTGAGCGGGGGCTATGGCTCGCGGCAGGTGATCCATCAGGTGAG
CTTCAGCCTGCAGGCGGGGGAATGGCTGAGCATTGTCGGCCCCAATGGCTCCGGCAAATCGACGTTGCTGCGGCTGCTGA
GCCGAGTGTTGATCCCGCAGGCGGGGCGTGTGTACCTGAACGGTTGGGATCTGCACACCCAGCTCAGCCCGCAACAGGTG
GCCCGGCAGTTGGCCCTTTTGCCCCAGCAGCCGCGGATCCCGGCAGGGCTGACGGTGTGGCAATTGGTGAGCTTGGGGCG
TTCTCCTCACCAGCCCTGGTGGGTGTGGCAGTTGCCGCGGGCAGATCGGCAGCGGGTGGAATGGGCGCTGGCGCAGACGG
GACTGGGATCCCTGGCCCTGAGGCGGGTGGAGACGCTCTCCGGCGGCGAGCGGCAGCGGGCTTTCCTGGCGCTGGCCCTG
GTGCAGGAGCCGCAGGTGCTGCTGTTGGACGAGCCCACCACGTTTTTGGATCTGCGCCACCAACTGGAGCTGCTGGAGCT
GTTGCGACGGCTGCAGCAGGAGCAAGGGCTGACGGTGATTACCGTGCTGCACGACCTGAACCTGGCCATTCGCTACAGCC
GGCGGGTGGCCCTGCTGGGATCCGGCCAGTTGCAGGCCCTGGGATCCCCGCAGGCGGTCTTGACCCCCAGCAGGGTGCAG
GAGGTGTTTGGCCTGGAGGTGGAGTGGATGCCAACGCCGGTGGGGCCGCAGCTTTGCCCCCTGCGCAGCGCAGACCCAGC
AAGGCCCCTCTGGCTGGGAGGAAAGGGTGTTGAGGCGAAGGTTTGA

Protein sequence : 
MREGRPILQAEGLSGGYGSRQVIHQVSFSLQAGEWLSIVGPNGSGKSTLLRLLSRVLIPQAGRVYLNGWDLHTQLSPQQV
ARQLALLPQQPRIPAGLTVWQLVSLGRSPHQPWWVWQLPRADRQRVEWALAQTGLGSLALRRVETLSGGERQRAFLALAL
VQEPQVLLLDEPTTFLDLRHQLELLELLRRLQQEQGLTVITVLHDLNLAIRYSRRVALLGSGQLQALGSPQAVLTPSRVQ
EVFGLEVEWMPTPVGPQLCPLRSADPARPLWLGGKGVEAKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-39 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-30 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-31 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-31 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 1e-31 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-31 44
phuC YP_005686351.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 4e-19 41
phuC YP_005682167.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-19 41
phuC YP_005684259.1 Iron(III) dicitrate transport permease-like protein yusV Virulence PiCp 7 Protein 3e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYA_2032 YP_475435.1 iron chelate ABC transporter ATP-binding protein BAC0164 Protein 1e-39 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYA_2032 YP_475435.1 iron chelate ABC transporter ATP-binding protein VFG1042 Protein 1e-39 45
CYA_2032 YP_475435.1 iron chelate ABC transporter ATP-binding protein VFG0925 Protein 3e-30 42