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Name : CYA_1958 (CYA_1958) Accession : YP_475366.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Unknown Product : ISSoc3, orfA transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1943 EC number : - Position : 1968830 - 1969306 bp Length : 477 bp Strand : - Note : identified by match to protein family HMM PF01797 DNA sequence : TTGGTCGTCGCTGGGCAGGATCCGGTACTCGTAGGTGATAATCATGAGACGGTTCTAGCATTTAGCGCAACGAGCTACAA CATAGGCCATCGTTCTGTTTACAGCCTACAAATCCACTTGGTGCTGGTGACAAAGTACCGTCGTCGGGTGATAACTGCTC CAATGTTGCAGAGGCTGGAAGATATATTTCGAGCGACCTGCCAAAAGTGGTGCTGTTCCTTGGTGGAGTTCAACGGTGAG GCGGATCATGTGCATCTGTTGGTGAGTTTTCCGCCGGATGTTCAGGTCTCGAAGCTGGTGAACAACCTGAAAACAGTCTC CAGCCGGTTGATTCGCAAAGAGTTCGCCACAGAGGTGGCACGGTTCTACAGCAAGCCTGTATTTTGGACAGGGGCCTATT TTGTTGCCTCTTGTGGTGGGGTCACCGTTGAGGAGTTGAAGAAGTATGTTGAGCAGCAGGCAACGCCCAGATTGTGA Protein sequence : MVVAGQDPVLVGDNHETVLAFSATSYNIGHRSVYSLQIHLVLVTKYRRRVITAPMLQRLEDIFRATCQKWCCSLVEFNGE ADHVHLLVSFPPDVQVSKLVNNLKTVSSRLIRKEFATEVARFYSKPVFWTGAYFVASCGGVTVEELKKYVEQQATPRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpA | AAR03856.1 | transposase A-like protien | Not tested | cag PAI | Protein | 3e-27 | 46 |
| tnpB | CAJ31328.1 | insertion sequence IS606 transposase homolog B | Not tested | cag PAI | Protein | 2e-26 | 45 |
