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Name : CYA_1893 (CYA_1893) Accession : YP_475303.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Unknown Product : peptide/nickel/opine uptake ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 1900194 - 1901972 bp Length : 1779 bp Strand : - Note : identified by match to protein family HMM PF00005 DNA sequence : ATGGCCGATGTCGCTCCGGTTGTCACTTCTGCCCTTCTGACTGTTCAGGGGTTGCGGGTTTTCTTGCCCAGCCGCACTGC CGGCAGCCAGGCAGAATGCTTGGGATCCCCGGTGGTGGATGGGCTGTCCTTTCAACTGGGGGCCGGACAAGTCCTGGGCT TAGTGGGGGAATCCGGATCCGGCAAGACCATAACCGCCCTGACGCTGATGGACTTGCTGCCCAGCTCCGCTCGGGTGGAA GGCACCATTCTCTTCCAGGGCCCCCAGGGAACAGTGGACTGGCTGCGGCTGGATCCCCGGCAACGGCGGCGCTACCGCGG CTCCCAGATCGCCATGATCTTCCAAGAGCCGAGCACCGCCCTCAACCCCCTCTACACCTGTGGCCAGCAGTTGCGGGAAA CCCTGAGGGCCCACACCTCCCTCCCCCCAGCGGAGCTCCGCGCCCAAGCCATCCGCCTGTTTGAGGAAGTGCAGCTTTCT CCCCAGATGCTGGAGCGCTATCCCCATCAGCTCTCCGGCGGCCAGATCCAGCGGGCGGCCATCGCCTGTGCCATCGCCTC TAACCCCAAGCTGTTGATTGCTGATGAGCCGACTACCGCCTTGGATGTAACGGTGCAAGCCGAGATCTTGCGCCTGCTCC GGGATCTGCAGCAGCAGCGACAGATGGCGATCCTCTTCATCACCCACGACCTCAATTTGGTGGCGGAATTGGCGGATCAG GTGGTGGTGATGTGCCGGGGCCAAGCCGTGGAACAAGGATCGGTGAAACAGATCTTTTGGGATCCCCAGCACCCCTACAC CCGCGGCCTGCTGGCCTGTCGCCCACCGTTGGAGCGGCGGTTGCGGCGGCTGCCCACCGTCCAGGATTTCCAGGAAAAGG GGGGATCCCTCGAGGAGCGGTGGCAGCAACTGGAGATCCCAGCCGCCGAAGAGGAAGAACGGCTGCGCCAGATATGCAGC CAGCCCCCTCTGTTGCAGGTGCGGGAGTTGCGCACCCACTATGCCGTCCGTCGCGGGCCATTGGGCCGCCAGGTGGGCGA GATCCGAGCTGTGGACGGGATCAGCTTCGACCTGTATCCAGGCGAAACCCTGGGGGTGGTGGGCGAGTCCGGCTGCGGCA AAACCACCCTGGGGCGAACCCTGTTGCGTCTAATCCGCGCCAGTTCCGGCCAGGTAATCTACGACGGAGAAGACTGGCTC CGCCTGCCGCCTCGGCGCCTGCGCCGCTTGCGCCGCGAGATCCAGCTTATCTTTCAGGATCCGGCAGCCTCTTTGGATCC GCGCATGAGTGTGGGAGCCAGCGTCATGGAGCCGATGGTGCTGCACGGGATGGGGAGAAACGCCGCCGAGCGGCGAGCAC GAGCCCAACGCCTGTTTGAACGAGTCGGGTTGGATCCCGAGGCGCTGGATCGTCTGCCCCACCAGTTTTCCGGCGGGCAG CGGCAGCGGATTTGCATCGCCCGCGCCCTGGCTTCGGAGCCGCGCCTGCTCGTCTGCGACGAGGCAGTGTCTTCCCTGGA TGTCTCCGTACAGGCCCAGGTGCTGAACTTGCTCAAGGATCTGCAGGAGGAGCTGGGACTGACCTATCTGTTCATCTCCC ACGACCTGAGCGTGGTCAAGTTCATGAGCGACCGCATTCTGGTCATGAACCGAGGCCGCATCGAAGAAATTGGCCCTGCC GCTCAGATCTACCGGAACCCGCAGCAGGACTATACCCGCCGCCTCATCGCCGCCATTCCCAAAGGGGATCCGAAAAAGCG TGCCCGCCAAGCCGGATGA Protein sequence : MADVAPVVTSALLTVQGLRVFLPSRTAGSQAECLGSPVVDGLSFQLGAGQVLGLVGESGSGKTITALTLMDLLPSSARVE GTILFQGPQGTVDWLRLDPRQRRRYRGSQIAMIFQEPSTALNPLYTCGQQLRETLRAHTSLPPAELRAQAIRLFEEVQLS PQMLERYPHQLSGGQIQRAAIACAIASNPKLLIADEPTTALDVTVQAEILRLLRDLQQQRQMAILFITHDLNLVAELADQ VVVMCRGQAVEQGSVKQIFWDPQHPYTRGLLACRPPLERRLRRLPTVQDFQEKGGSLEERWQQLEIPAAEEEERLRQICS QPPLLQVRELRTHYAVRRGPLGRQVGEIRAVDGISFDLYPGETLGVVGESGCGKTTLGRTLLRLIRASSGQVIYDGEDWL RLPPRRLRRLRREIQLIFQDPAASLDPRMSVGASVMEPMVLHGMGRNAAERRARAQRLFERVGLDPEALDRLPHQFSGGQ RQRICIARALASEPRLLVCDEAVSSLDVSVQAQVLNLLKDLQEELGLTYLFISHDLSVVKFMSDRILVMNRGRIEEIGPA AQIYRNPQQDYTRRLIAAIPKGDPKKRARQAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-76 | 41 |
