Gene Information

Name : devA (CYA_1880)
Accession : YP_475290.1
Strain : Synechococcus sp. JA-3-3Ab
Genome accession: NC_007775
Putative virulence/resistance : Resistance
Product : glycolipid ABC exporter (DevE) family ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1883316 - 1884053 bp
Length : 738 bp
Strand : +
Note : identified by similarity to GB:CAA05977.1; match to protein family HMM PF00005

DNA sequence :
ATGCTGCCTTCCCTTCTCGATCAAGCTGCCCTCGCTTCCACCCAACATGCCGTTGAGCCGGTGGTCAAAGCCGAAGGGGT
GAACCACTACTTTGGCGAGGGATCCCTGCGCAAGCAAGTGCTTTTTGACATCAACTTCGTTTTGCAGCCGGGGGAGATCG
TGTTGTTGACCGGCCCCTCTGGCTCCGGCAAGACCACGCTGCTCACGCTCCTGGGAGCTTTGCGCTCGGTGCAAGAGGGC
AGCCTGCGGGTGTTGGGGCAGGAGCTGCGGGGCGCTAAGCCCAACACCCTCATCCAGATCCGCCGCCAGGTGGGGTACAT
CTTCCAGGCCCACAACCTGCTGCGCTCCCTGACGGCGGCCCAAAATGTGCGCATGGCCCTGGAGCTGCACAACGGCCTTT
CTCCTCAACAGGTGCAGCAGCAGGCAGAAGCGATGCTGGCGGCGGTGGGTTTGGGGGATCGCGTCCACTACTACCCGGAG
CAGCTTTCGGGAGGGCAGAAGCAGCGGGTAGCCATCGCGCGGGCCCTGGTCAGCCACCCCAAGTTGGTGCTGGCCGACGA
GCCGACCGCAGCCCTGGACAGCAAGTCGGGCCGCGAGGTGGTGACCCTGATGGAGAAGTTGGCGCGAGAGCAGGGCTGCA
CCATCCTCATGGTGACCCACGACAACCGCATCCTCGACATTGCCGACCGGGTGTTGCACATGGAGGATGGCCGCCTGGAG
AGCCAGGTTGTTGCCTAG

Protein sequence :
MLPSLLDQAALASTQHAVEPVVKAEGVNHYFGEGSLRKQVLFDINFVLQPGEIVLLTGPSGSGKTTLLTLLGALRSVQEG
SLRVLGQELRGAKPNTLIQIRRQVGYIFQAHNLLRSLTAAQNVRMALELHNGLSPQQVQQQAEAMLAAVGLGDRVHYYPE
QLSGGQKQRVAIARALVSHPKLVLADEPTAALDSKSGREVVTLMEKLAREQGCTILMVTHDNRILDIADRVLHMEDGRLE
SQVVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-23 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-24 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-24 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
devA YP_475290.1 glycolipid ABC exporter (DevE) family ATP-binding protein NC_008702.1.4606598. Protein 4e-24 42
devA YP_475290.1 glycolipid ABC exporter (DevE) family ATP-binding protein NC_012469.1.7685735. Protein 9e-28 41