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Name : clpB (CYA_0180) Accession : YP_473669.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 176758 - 179400 bp Length : 2643 bp Strand : - Note : identified by similarity to SP:P03815; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724 DNA sequence : ATGCAGCCCACCAATCCCAACCAATTTACCGAGAAAGCCTGGAGCGCCATTGTCCAATCCCAAGATGTAGCCCGGCGGCA CCAGCAGCAACAGTTGGAAACCGAGCATTTGCTGATCTCCCTTCTGGATCAAGAGGGGGGTCTCACCCAGACCATTTTGC AGCGGGCCGGCCTCGATCCGAGGCTGGTGCGGGATAGAGTGGAAAGCTTTATCAACCAGCAGCCCAAGCTGGCGCGGGTG GATCAGCTCTACCTAGGCCGCGGCCTGGAGACCACGCTGGATCGAGCCGAGGAGTTTCGCAAAGAGTATGGCGATGATTT TATCTCGGTAGAGCACTTGCTTTTGGGATCCCTGGACGACGAGCGGGTGGGCAAGCGCGTTCTAGCACCCCTGGGCTTGA CGGTCGAGCGCCTCAAGCCCGTTATCCAACAGGTGCGAGGCAAACAGCGGGTTACCGACAAAAATCCCGAGTCCCGCTAC GAGGCCCTGGAGCGCTATGGCCGCGACTTGACCAAGGCCGCCCGCGAAGGGAAGCTGGATCCGGTGATTGGGCGGGACGA CGAGATCCGCCGCGTCATTCAGGTGCTCTCCCGCCGCACCAAAAACAACCCCGTCCTCATCGGCGAGCCGGGTGTGGGGA AAACCGCCATCGTCGAGGGCCTGGCCCAGCGCATCAACCGGGGAGACGTGCCGGAGTCGCTGAAAAACCGGCGGGTGATC GCCCTGGATATGGGATCCCTGATTGCCGGCGCCAAGTACCGCGGCGAGTTTGAAGACCGCCTCAAAGCCGTGCTCAAGGA GGTCACCGAATCGGAAGGGCAGATCATCCTCTTCATCGACGAGCTGCACACCGTGGTGGGGGCAGGGGCGGCCGAAGGGG CGATGGATGCCGGCAACCTGCTCAAGCCCATGCTGGCCCGCGGCGAATTGCGCTGCATTGGCGCCACCACCCTGGATGAA TACCGCAAGCACATCGAAAAAGACGCCGCCCTGGAGCGCCGCTTCCAGCCGGTGTATGTGGATCAGCCCTCCGTGGAAGA CACCATCTCCATCCTGCGCGGCCTCAAAGAGCGCTACGAGCTGCACCACGGGGTCAAAATCAGCGACTCGGCCCTGGTGG CAGCGGCAGTCCTCTCCAACCGCTACATCTCCGAGCGCTTCCTGCCCGACAAGGCCATCGACCTGGTGGACGAAGCGGCG GCCAAGCTGAAGATGGAGATCACCTCCAAGCCCGTCGAATTGGATGAAATCGACCGGCGCATCATGCAACTGCAGATGGA GGAGCTCTCCCTCAAGAAAGAAGACGACCCCGCCTCCAAAGAGCGCCTGGGCAAAATTGAGCAGGAGCTAGCCAACTTGA TGGAGCGGCAGCGGGAGCTGAGCGCCCGTTGGCAAATGGAAAAAGAGGCCATCGAGCGGCTGCAAAACCTCAAGGCCGAG CGGGATGCCGTCAAGCTGCAGATTGAACAGGCAGAACAAAAATATGACCTCAACCGCGCTGCCGAGCTCAAATACGGCAA GCTCATGGAGCTGGAGCGCCAGATCCAAGAGCAGGAGGCCCACCTGGCCAAGCTGCAGGCCAACGGCGAGCCCTTGTTGC GGGAGCAGGTGACGCCCGAAGACATTGCCGAGATCGTCTCCCGCTGGACCGGGATCCCGGTCACCAGCCTGATGGAGTCG GAAAAGCAGAAGCTGCTGCGCCTGGAAGCCCACTTGCACCAGCGGGTGGTGGGCCAGGACGAGGCGGTAGCGGCGGTGGC AGCCGCCATCCGGCGGGCCCGGGCCGGCCTCAAGGATCCCAATCGGCCCATCGGCTCGTTCCTGTTCATGGGGCCCACCG GCGTCGGGAAGACCGAGCTGGCCCGCGCCCTGGCGGAGTTCCTCTTCGACACCTCCGAGGCCATGGTGCGCATCGACATG TCGGAGTACATGGAGAAGCACTCCGTCTCCCGCTTGATTGGGGCTCCGCCGGGCTATGTGGGCTACGAAGAAGGCGGGCA GCTCTCGGAAGCGGTGCGGCGGCGCCCCTACTCGGTGGTGCTCTTTGACGAGGTGGAAAAAGCCCACCCTGATGTCTTCA ACATCCTGCTGCAGGTGCTGGACGACGGCCGCATCACCGACTCCCAAGGCAGGACGGTGGACTTCAAAAACACCATCATC ATCATGACCAGCAACATTGGCAGCGAGCTCATCCTGGAAATTGGCGGCGACGAGAGCCGCTACGAGGAGATGAAAAGCCA GGTGCTGGCCATGCTGCGGCACCACTTCCGGCCGGAGTTCCTCAACCGGGTGGATGAACTGATCATCTTCCACGCTCTAA CCAAAGAGCAAATCCGCCAGATCGTCAGCCTGCAGATGCGGCGGGTGGAGCAGTTGCTGGCGGATCAGCAAATTGAAATT GTCCTCACCGAAGAGGCCAAGGACTACCTGGCCGAGCTGGGCTACGACCCCGTGTTTGGCGCCCGCCCGCTGAAGCGGGT AATCCAGCGGGAGATCGAAAACCCCCTCGCCACCAAGCTGCTGGAAAACGAGTTCCTGCCCGGCGACCGCATCCTGGTGG AGGTGGCCAACGAGCGGCTGATCTTCCGCAAGATCGGCTCTCAGCCCCGCCAAGAGCCGCCTGCTGCTGTAGCCGTCAGC TAG Protein sequence : MQPTNPNQFTEKAWSAIVQSQDVARRHQQQQLETEHLLISLLDQEGGLTQTILQRAGLDPRLVRDRVESFINQQPKLARV DQLYLGRGLETTLDRAEEFRKEYGDDFISVEHLLLGSLDDERVGKRVLAPLGLTVERLKPVIQQVRGKQRVTDKNPESRY EALERYGRDLTKAAREGKLDPVIGRDDEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRINRGDVPESLKNRRVI ALDMGSLIAGAKYRGEFEDRLKAVLKEVTESEGQIILFIDELHTVVGAGAAEGAMDAGNLLKPMLARGELRCIGATTLDE YRKHIEKDAALERRFQPVYVDQPSVEDTISILRGLKERYELHHGVKISDSALVAAAVLSNRYISERFLPDKAIDLVDEAA AKLKMEITSKPVELDEIDRRIMQLQMEELSLKKEDDPASKERLGKIEQELANLMERQRELSARWQMEKEAIERLQNLKAE RDAVKLQIEQAEQKYDLNRAAELKYGKLMELERQIQEQEAHLAKLQANGEPLLREQVTPEDIAEIVSRWTGIPVTSLMES EKQKLLRLEAHLHQRVVGQDEAVAAVAAAIRRARAGLKDPNRPIGSFLFMGPTGVGKTELARALAEFLFDTSEAMVRIDM SEYMEKHSVSRLIGAPPGYVGYEEGGQLSEAVRRRPYSVVLFDEVEKAHPDVFNILLQVLDDGRITDSQGRTVDFKNTII IMTSNIGSELILEIGGDESRYEEMKSQVLAMLRHHFRPEFLNRVDELIIFHALTKEQIRQIVSLQMRRVEQLLADQQIEI VLTEEAKDYLAELGYDPVFGARPLKRVIQREIENPLATKLLENEFLPGDRILVEVANERLIFRKIGSQPRQEPPAAVAVS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-100 | 43 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-98 | 42 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-98 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_473669.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 2e-114 | 44 |
| clpB | YP_473669.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 4e-104 | 43 |
