Gene Information

Name : CYA_1679 (CYA_1679)
Accession : YP_475098.1
Strain : Synechococcus sp. JA-3-3Ab
Genome accession: NC_007775
Putative virulence/resistance : Virulence
Product : manganese/zinc/iron chelate ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1678373 - 1679128 bp
Length : 756 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGAAAAAACCAGCGGTTTCTCTCCCGCTTCGTCCGGCCTCCCTGGTGGTGCGGGATCTGACGGTGCGCTACGGCAAGTT
GCTGGCGTTGGAGAGGATCGGCGCCGAGATCCGGCCGGGGCGCATCACGGGCATCCTGGGGCCCAACGGGGCCGGCAAGA
GTACATTGCTCAAGGCGCTGTTGGGGTTGGTGCCCAAAGAGGGGGGCGAGGTGCGCTACGGCGGCCAGGTGCTGCGGGGG
GAGCAAGTGGCCTATGTGCCGCAGCGGTCGGCCATCGACTGGAGCTTTCCGGCCACGGTGTGGGATGTGGTGCTGATGGG
ACAGGTAAGAGCTGCCGGCTGGTTGCGCCGCATCGGGCCAGAAGGTCGGGAGCGGGCCGCGCAAGCCCTGGAGCGGGTGG
GGATGGGAGCCTATCGGGATCGGCCCATTGGTCGGCTATCAGGGGGACAGCAGCAGCGGGTGTTTTTGGCGCGGGCTCTA
GCGCAGGAAGCGGAGATCTACGCCCTGGACGAGCCGCTGGCCGGGATCGACCAGCCCAGCGAGGCCATTGTGTTTCAGGT
GTTGCGGGAGCTGGCCGACGCCGGCCATATCGTGATGGTGGTGCACCACGACCTGGGGCAGGCGCTGGCCTACTTTGACG
AGGTGCTGCTCCTCAACCGCGTGCTGATTGCCCAGGGATCCCCGCAGCAGGTGTTGCAGCCGCAGGTGTTGCAGCGGGCC
TATGGCCGTATCCTGCCCTTGGACTCGGCTGCCTAG

Protein sequence :
MKKPAVSLPLRPASLVVRDLTVRYGKLLALERIGAEIRPGRITGILGPNGAGKSTLLKALLGLVPKEGGEVRYGGQVLRG
EQVAYVPQRSAIDWSFPATVWDVVLMGQVRAAGWLRRIGPEGRERAAQALERVGMGAYRDRPIGRLSGGQQQRVFLARAL
AQEAEIYALDEPLAGIDQPSEAIVFQVLRELADAGHIVMVVHHDLGQALAYFDEVLLLNRVLIAQGSPQQVLQPQVLQRA
YGRILPLDSAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 1e-44 47
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 9e-45 47
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 4e-37 41
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 4e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYA_1679 YP_475098.1 manganese/zinc/iron chelate ABC transporter ATP-binding protein BAC0400 Protein 6e-46 52