Gene Information

Name : rplS (CYA_1619)
Accession : YP_475042.1
Strain : Synechococcus sp. JA-3-3Ab
Genome accession: NC_007775
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1622498 - 1622881 bp
Length : 384 bp
Strand : -
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGAACGCTCGCATCAACGCCGAAGAGATCATCCGCTCCATCGAAGCGGCCCACATGAAGTCGGATCTGCCAGAGATCCA
TGTTGGCGATCAGGTACGGGTGGGGGTGCGCATTCAAGAGGGCGGCAAAGAGCGGGTGCAGGCCTTTGAAGGCACGGTCA
TTGCTATGCGTCACTCTGGATGCAACCGCACCATCACGGTGCGCAAGATTTTCCAGGGAATTGGAGTGGAGCGGGTCTTC
CTAGTTCACTCGCCGCGCATCGACTCAATCCAGGTGTTGCGGCGTGGCAAGGTGCGGCGGGCCAAGCTGTTCTATCTGCG
AAACCGAGTGGGCAAGGCCACTCGCATCAAAGCCAAAACGGATTCTAAAGAAGAAACCCTCTAA

Protein sequence :
MNARINAEEIIRSIEAAHMKSDLPEIHVGDQVRVGVRIQEGGKERVQAFEGTVIAMRHSGCNRTITVRKIFQGIGVERVF
LVHSPRIDSIQVLRRGKVRRAKLFYLRNRVGKATRIKAKTDSKEETL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 5e-26 57
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 2e-24 53