|
Name : ctaD (CYA_1513) Accession : YP_474942.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Unknown Product : cytochrome c oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 1521127 - 1522836 bp Length : 1710 bp Strand : - Note : identified by similarity to SP:Q06473; match to protein family HMM PF00115 DNA sequence : ATGACCCAGCTACAGGACAATCCCACCCTTGCCGCTGCCCCCAAAGCCAGCCTGGATCCTCCCGCCGAGCCTTGGTGGCG CTTTTTTACCTTCTCCACCGATCACAAGGTCATTGGGATCCAGTATTTGGTGACCACCTTTTTCTTCTACTTGGTGGGGG GAGCGCTGGCCACAGCGGTACGGGCGGAGCTGGCTACCCCAGAGGCGGACTTTCTCGGCTTTGAGCGCTACAACGGGGCC TTTACCCTGCACGCCACGATCATGATCTTTTTGTGGATCGTGCCGGCTTTGATGGGGGGCTTTGGCAACTACCTGGTGCC GCTGATGATCGGGGCGCGGGACATGGCCTTTCCCAAGCTGAACGCCGTCGCCTTTTGGCTGGTTCCACCCAGTGGCCTTT TGCTGCTGGCCAGCTTGTTTATCGAGGCCCCCTCAGCTGGCTGGACCTCGTATCCGCCGCTGAGCCTCATCAGTGGCAAG GTGGGAGAAGAGCTCTGGATCTTGAGCATTTTGCTGGCCGGAACCTCTTCGATCCTGGGGGCCGTGAACTTCATCACCAC CATCCTCAAGATGCGCCTGCCCGGCATGAAGATGGAGGGTATGCCCTTGTTCTGCTGGGCGATGCTGGCCGCTTCCATCA TCACGCTCATTGCAACGCCGGTTCTGGCGGGGGCGCTGATCCTGCTCAGCTTTGACCTGTTGGCGGGCACGGCTTTCTTC AACCCCAGCGGCGGCGGGGATCCGGTGGTGTACCAGCACATGTTCTGGTTTTACTCCCACCCGGCGGTGTACATCATGGT TTTGCCGGTGTTCGGCATGATCTCGGAGATCTTGCCGGTGCACGCCCGCAAGCCCATCTTTGCCTACAAAGCCATTGCCT ACTCCAGCTTGGCCATCTGTTTTTTGGGCTTGATTGTCTGGGTTCACCACATGTTTACCAGCGGCACTCCCGACTGGATG CGGGTGTTTTTCATGATCGCCACCATGGCCATTGCCGTTCCCACCGGGATCAAGGTGTTTAGCTGGCTGGCGACTCTCTG GGGCGGCAAGATCCACTTCCGCTCGGCCATGTTGTTTGGCATGGGCTTTATCTCCATGTTCGTCATCGGCGGCTTGAGCG GGATCATCCTTGCTTCGGTGCCGTTGGATATCCACGTCCACGACACCTACTTTGTGGTGGCCCACCTACACTACGTGTTG TTTGGCGGCAGCGTCTTTGGCATCTATGCCGGCCTCTACCACTGGTTCCCCAAGATGACCGGGCGGCTGCTGAACGAGTT CTGGGGGCGGGTGCATTTTGTGTTGACCTTTGTCGGCTTCAACATGTGCTTTTTGCCGATGCACAAGCTGGGCCTGATGG GCATGCCCCGCCGCGTGGCCCAGTACGACCCGCAATTTGCCGACCTCAACTGGATTAGCTCCGTGGGGGCTTTTGTTCTA GCCATTTCCACGCTGCCCTTCTTGGTGAACGCCATCTACTCCTGGGTGGCCGGGCCCAAGGCCGGCGACAACCCCTGGCA GGCTCTAACCCTGGAGTGGGCGACTTCTTCCCCGCCGCCTGCCCACAACTTCTACGGGGATCCCATTCTGCTGACCGGCC CCTACGACTACGGCCTGCACAGCAAGGAGACTTTGGATTACTTTGCCGCCCAGTTGCAGAGCTTGCGGGAGCTGGCGTTG GCGGAAGCAGAGCCTACGACTTCTTCTTAG Protein sequence : MTQLQDNPTLAAAPKASLDPPAEPWWRFFTFSTDHKVIGIQYLVTTFFFYLVGGALATAVRAELATPEADFLGFERYNGA FTLHATIMIFLWIVPALMGGFGNYLVPLMIGARDMAFPKLNAVAFWLVPPSGLLLLASLFIEAPSAGWTSYPPLSLISGK VGEELWILSILLAGTSSILGAVNFITTILKMRLPGMKMEGMPLFCWAMLAASIITLIATPVLAGALILLSFDLLAGTAFF NPSGGGDPVVYQHMFWFYSHPAVYIMVLPVFGMISEILPVHARKPIFAYKAIAYSSLAICFLGLIVWVHHMFTSGTPDWM RVFFMIATMAIAVPTGIKVFSWLATLWGGKIHFRSAMLFGMGFISMFVIGGLSGIILASVPLDIHVHDTYFVVAHLHYVL FGGSVFGIYAGLYHWFPKMTGRLLNEFWGRVHFVLTFVGFNMCFLPMHKLGLMGMPRRVAQYDPQFADLNWISSVGAFVL AISTLPFLVNAIYSWVAGPKAGDNPWQALTLEWATSSPPPAHNFYGDPILLTGPYDYGLHSKETLDYFAAQLQSLRELAL AEAEPTTSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 3e-103 | 47 |
