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Name : glnA (CYA_1363) Accession : YP_474797.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Virulence Product : glutamine synthetase, type I Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : 6.3.1.2 Position : 1373605 - 1375029 bp Length : 1425 bp Strand : + Note : identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653 DNA sequence : ATGGCATCCACGCCCCAAGAAGTGCTTCAGATGATCCAGGACAACGATGTCCAGATGGTGGATCTCAAGTTTGTGGACAT CTTCGGCACCTGGCAGCATGTCTCCTTCCACCCCTCGATGATCACTGAAGAAACCTTCCGCGAGGGAATCCCTTTCGACG GATCCAGCATTCGGGGTTGGAAAGCGATCAACGAGTCGGACATGTACATGGTGCCGGATCCCAAGACGGCCTGGATCGAC CCATTTTTTCAAGTGCCCACCCTCAGCCTCATCTGCAACATCATCGAGCCGCGCACTGGCCAGCCCTACAGCCGTTGTCC GCGGAGCCTGGCGGCGCGGGCGGTTGCCTATCTGCAGTCTACCGGCATTGCCGACACGGCTTACTTTGGCCCAGAGGCAG AGTTTTTCATTTTTGAAGATGTGCGGTTTGACCAAACCCAAAATGCCGGCTACTACTTCGTAGATTCGATTGAGGGCCGC TGGAACTCAGGCCGGGAGGAAAAAGGCGGCAACCTCGGTTACAAGCCGCGCTACAAAGAAGGCTATTTCCCCGTCCCGCC TACCGATGCTCATCAAGACCTCCGCACCGAGATGCTGCTGACGATGGCCAAGTTGGGGGTGCCTATCGAGAAGCACCACC ACGAGGTGGCTACCGGCGGGCAAGGGGAGCTGGGCTACCGCTTTGCCGATCTGATCACGGCTGCCGACTACATGATGATT TACAAGTACGTGATCCGGAACGTGGCCCGCAAGCACGGCAAGACGGTGACGTTCATGCCCAAGCCCCTCTTCAATGACAA CGGCAGCGGCATGCACACGCACCAGTCCCTCTGGAAAGACGGTCAGCCCCTGTTCTACCAAGAGGGCAACTATGCCGATC TCAGCGAAACGGCTCTCTACTACATCGGCGGCCTGCTCAAGCACGCCCCGGCCATCCTGGCCTTCACCAATCCCACCACC AACTCCTACAAGCGCTTGGTGCCCGGGTTTGAGGCGCCGGTAAACCTGGCCTACTCGCAGGGCAACCGCTCGGCTTCCAT TCGCATTCCGGTCACGGGCAAAAATCCCAAGGCCAAGCGGCTGGAGTTTCGCTGCCCCGATGCCACCTGCAACCCCTACA TCGCCTTCTCGGCCATGTTGATGGCCGGCTTGGACGGGATCAAGAACAAGATCCACCCCGGCGAGCCCCTGGACAAAGAC ATCTACGATCTAGAGCCAGACGAGCTGGCCAAGATCCCCTCCACGCCCGGATCCCTGCTGGATGCTCTGGAAAGCCTGCA GAAGGATCACGCTTTCTTGTTGGAGGGAGGTGTCTTTACCGAAGATCTCATCGAGGCCTACATCGAGTACAAAATTGACA ACGAGATCAACCCCATCAACCTGCGGCCTCACCCCTACGAGTTCGCGCTCTATTTCGACGCCTGA Protein sequence : MASTPQEVLQMIQDNDVQMVDLKFVDIFGTWQHVSFHPSMITEETFREGIPFDGSSIRGWKAINESDMYMVPDPKTAWID PFFQVPTLSLICNIIEPRTGQPYSRCPRSLAARAVAYLQSTGIADTAYFGPEAEFFIFEDVRFDQTQNAGYYFVDSIEGR WNSGREEKGGNLGYKPRYKEGYFPVPPTDAHQDLRTEMLLTMAKLGVPIEKHHHEVATGGQGELGYRFADLITAADYMMI YKYVIRNVARKHGKTVTFMPKPLFNDNGSGMHTHQSLWKDGQPLFYQEGNYADLSETALYYIGGLLKHAPAILAFTNPTT NSYKRLVPGFEAPVNLAYSQGNRSASIRIPVTGKNPKAKRLEFRCPDATCNPYIAFSAMLMAGLDGIKNKIHPGEPLDKD IYDLEPDELAKIPSTPGSLLDALESLQKDHAFLLEGGVFTEDLIEAYIEYKIDNEINPINLRPHPYEFALYFDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 1e-102 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| glnA | YP_474797.1 | glutamine synthetase, type I | VFG1399 | Protein | 4e-135 | 60 |
