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Name : CYA_1033 (CYA_1033) Accession : YP_474491.1 Strain : Synechococcus sp. JA-3-3Ab Genome accession: NC_007775 Putative virulence/resistance : Resistance Product : DNA-binding response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1050354 - 1051103 bp Length : 750 bp Strand : + Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00486 DNA sequence : ATGCAAGCAACCCTTTCCATGACCAGTCAACTTCCCGAAGTTCAAGTCAAGGAAGCTCCTCCCCTTCTGGAGACTCTGCT GGTGGTGGACGATGAGGATGCAATCCGAGAAACCGTTGCCGTTGCTCTCGAAGAACAGGGATACCAAGTTTTGCAGGCCG CCGATGGTCGACAAGCGCTGGAGCTGGTTCACACGGCCGAACGGCTGGATTTGATGATCTTGGATTTGATGCTGCCCGGC TTGAACGGCTTGGATCTGTGCCGGCTGTTGCGCCGGGAGGGCAACACCATCCCCATCCTGATGCTGACGGCCAAAAGCAG CGAGACCGACCGGGTGGTGGGCCTGGAGCTGGGAGCCGACGACTACCTGACCAAGCCCTTCGGCATGCGGGAGCTGATCG CCCGCTGTCGCTCCGTGTTGCGCCGTCGGCAGCAGTCCCACGCCAGCGAGGCCACGGTGCTCCGCTACGGGGATATTTGC ATGTTTACCCAAGAGTGTCGCGTCTTGGTGCGGGGAGTGGAGGTGAGTTTCTCGCCTAAGGAGTTCCGCCTGCTGGAGCT GTTTATGTCCAACCCTCGCCGCGTCTGGACGCGGGAACAGCTCTTGGAGCGCATCTGGGGATCCGACTTCATGGGCGACA GCAAAACGGTGGACGTCCACATCCGCTGGCTGCGGGAAAAGTTGGAGCTGGATCCCAGCAACCCAGAGTATTTGGTGACG GTGCGCGGCTTCGGCTATCGCTTTGGCTAG Protein sequence : MQATLSMTSQLPEVQVKEAPPLLETLLVVDDEDAIRETVAVALEEQGYQVLQAADGRQALELVHTAERLDLMILDLMLPG LNGLDLCRLLRREGNTIPILMLTAKSSETDRVVGLELGADDYLTKPFGMRELIARCRSVLRRRQQSHASEATVLRYGDIC MFTQECRVLVRGVEVSFSPKEFRLLELFMSNPRRVWTREQLLERIWGSDFMGDSKTVDVHIRWLREKLELDPSNPEYLVT VRGFGYRFG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 4e-25 | 43 |
| vanRB | YP_008394254.1 | DNA-binding response regulator VanRB | Not tested | Not named | Protein | 5e-27 | 42 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 5e-24 | 42 |
| vanRB | NP_815956.1 | DNA-binding response regulator VanRB | Not tested | Not named | Protein | 6e-27 | 41 |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 5e-35 | 41 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 6e-35 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | AE016830.1.gene1681. | Protein | 3e-48 | 49 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_002952.2859905.p0 | Protein | 4e-39 | 47 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_013450.8614421.p0 | Protein | 3e-39 | 47 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_007793.3914279.p0 | Protein | 3e-39 | 47 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_007622.3794472.p0 | Protein | 4e-39 | 47 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_002745.1124361.p0 | Protein | 3e-39 | 47 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_009782.5559369.p0 | Protein | 3e-39 | 47 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_002951.3237708.p0 | Protein | 3e-39 | 47 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_003923.1003749.p0 | Protein | 3e-39 | 47 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_002758.1121668.p0 | Protein | 3e-39 | 47 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_009641.5332272.p0 | Protein | 3e-39 | 47 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_012469.1.7685629. | Protein | 5e-41 | 46 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | NC_012469.1.7686381. | Protein | 1e-41 | 44 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | HE999704.1.gene2815. | Protein | 6e-46 | 44 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | AE000516.2.gene3505. | Protein | 4e-34 | 43 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | AF310956.2.orf0.gene | Protein | 2e-27 | 42 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | BAC0197 | Protein | 6e-27 | 42 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | CP000034.1.gene3671. | Protein | 3e-37 | 42 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | U35369.1.gene1.p01 | Protein | 3e-27 | 41 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | AE016830.1.gene2255. | Protein | 3e-27 | 41 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | HE999704.1.gene1528. | Protein | 2e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | VFG1390 | Protein | 3e-39 | 44 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | VFG0596 | Protein | 2e-25 | 43 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | VFG1389 | Protein | 1e-31 | 42 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | VFG1563 | Protein | 3e-35 | 41 |
| CYA_1033 | YP_474491.1 | DNA-binding response regulator | VFG1702 | Protein | 3e-35 | 41 |
