Gene Information

Name : RHE_PF00359 (RHE_PF00359)
Accession : YP_472976.1
Strain :
Genome accession: NC_007766
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 403969 - 405396 bp
Length : 1428 bp
Strand : +
Note : Similar to mll2219 [Mesorhizobium loti] and SMc01971 [Sinorhizobium meliloti]; Similar to swissprot:Q98IW5; location:bacterial inner membrane Psort-Score: 0.1086

DNA sequence :
ATGAAACATGCCCACAGCTTTTATATCGACGGGGAGTGGGTCGAGCCGTCCGTATCGAAAACACTTGAGGTCATCGATCC
CTCGACGGAGCAGCCGATCGGAACGATCGCAGTCGGAAGTGCCGCCGACGCGGAAAAGGCGGTCGCGGCTGCGCGGCGGG
CCTTTGCCTCCTTCTCGCAGACGTCCGATGGAGAGCGCATCGAACTGCTGAAGCGCATTGTAAAGCTGCTGAAACGCCGC
AATGATGAGCTCGGCGATGTCATCTCACGGGAAATGGGCGCGCCGCTCACCATGGCCCGGGCTGATCAGGCCGGCATCGG
CGCTGTCCATTTCGAGCAGGCGATCAAGGCCATGGAGACTTTTGCCTTCGACTACATGCAGGGGACCACGCGCATCCTGC
GCGAGCCAGTCGGCGTGGTTGCGATGATCACGCCATGGAATTGGCCGATCAATCAGATCGCCTGCAAGGTCGCTCCGGCG
CTCGCCACGGGATGCACCATGGTCCTGAAGCCTTCGGAGATCGCTCCGTTTAACGCCGTCATTTTCGCCGAGATCATGGA
TGAGGCCGGCGTCCCGAAGGGAGTCTTCAACCTCGTCCAGGGCGACGGGCCTAGCGTAGGTGCGGTACTGGCCGGCCACC
CGGATGTGGACATGGTGTCCTTCACCGGGTCGACCCGCGCCGGCATTGCCGTGGCGCAGGCGGCGGCACCGACCGTCAAG
CGGGTGCATCAGGAGCTCGGCGGCAAGTCGCCGAACATCGTCTTGCGCAGTGCCGACTTTTCAACCGCGGTCGCCACCGG
CGTGCGCCGGTGCTTCGGCAACTCCGGCCAGACCTGTACCGCGCCAACGCGGATGCTGGTGCCGGCGGAGCGAATGGACG
AAGCAAGCGCAATCGCTGCTAGGGAAGCGGCTGCGCTCGTTGTCGGTCCGCCCGCGGATCCGCGCACCAACCTCGGACCA
GTCGCAAGCACCGCGCAGTTCAACAAGATCCAGGCGTTGATCGAACGCGGCATCGCGGAAGGAGCGGCGCTGGTCGCGGG
TGGCCCTGGCCGCCCGTCGCATCTCAATGCTGGTTATTACGTGCGCCCGACCGTGTTTGCCCGCGTCACCAATCAGATGA
CGATCGCCCGCGAGGAGATCTTCGGCCCGGTACTCTCGATCATCGGCTATGACAGCGAAGAGGAAGCGGTCGCGATCGCC
AACGACACGCCCTATGGCCTGGCAGCCTACATTCAGGGCGATCCGAAGGAGGCGCGCGCGATCGCAGGCAGGCTGCGCGC
CGGAACCGTTCGCCTCAACGGTTCCGCCTGGGACGCAGCCGCCCCTTTCGGCGGCTACAAGCAATCAGGCAACGGTCGGG
AGTATGGGAAATTCGGACTGCACGAGTTTACCGAGATCAAGGGCATCGTCGGCTTCTTGGACGCGTGA

Protein sequence :
MKHAHSFYIDGEWVEPSVSKTLEVIDPSTEQPIGTIAVGSAADAEKAVAAARRAFASFSQTSDGERIELLKRIVKLLKRR
NDELGDVISREMGAPLTMARADQAGIGAVHFEQAIKAMETFAFDYMQGTTRILREPVGVVAMITPWNWPINQIACKVAPA
LATGCTMVLKPSEIAPFNAVIFAEIMDEAGVPKGVFNLVQGDGPSVGAVLAGHPDVDMVSFTGSTRAGIAVAQAAAPTVK
RVHQELGGKSPNIVLRSADFSTAVATGVRRCFGNSGQTCTAPTRMLVPAERMDEASAIAAREAAALVVGPPADPRTNLGP
VASTAQFNKIQALIERGIAEGAALVAGGPGRPSHLNAGYYVRPTVFARVTNQMTIAREEIFGPVLSIIGYDSEEEAVAIA
NDTPYGLAAYIQGDPKEARAIAGRLRAGTVRLNGSAWDAAAPFGGYKQSGNGREYGKFGLHEFTEIKGIVGFLDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-55 44
hpaE AAO17179.1 HpaE Not tested tcd island Protein 6e-49 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHE_PF00359 YP_472976.1 aldehyde dehydrogenase VFG0082 Protein 2e-45 41