Gene Information

Name : RHE_PF00231 (RHE_PF00231)
Accession : YP_472848.1
Strain :
Genome accession: NC_007766
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 244523 - 246244 bp
Length : 1722 bp
Strand : -
Note : Similar to Atu4195 [Agrobacterium tumefaciens str. C58]; Similar to swissprot:Q8U8A3; location:bacterial cytoplasm Psort-Score: 0.2703

DNA sequence :
ATGACCGACATCGTACCCATTGCCGGCAGGCCGCTTCTTGAGGTGAAGAACCTCACCGTCGAATTCCCGCTGCGCACCGG
CGTCTTTCGCGCCGTCAGCGACCTGTCCTTTACAATAGAGCCGGGCAAAACGCTCTGCGTGGTGGGTGAAAGCGGATCCG
GAAAGTCGGTGACGGCGCGCTCGATCCTGCAGATTGTCGACACGCCCGGCCGTATTGCCGGTGGTTCGATCACACTGAAC
CACCCGAAGGGCGGCTCGATTGATCTGACCAGCCTCAATCCGCGCGGGCGACAGATCCGGGCGATCCGCGGCCGCGATAT
CGCGATGATCTTCCAGGAGCCGATGTCGTCGCTGTCGCCCATCCATACCGTTGGCAACCAGATCATCGAGGCGCTTCGCC
TTCACACCAGGATGAGCAAGGCGGAGGCGCGCGTCGAGGCCATATCGCTGCTCAAGCAGGTCGAGATCCCCGCGCCGGAG
AAGGCGTTGGATCGCTACGCCTTCCAATATTCCGGTGGCATGCGCCAGCGCGCGATGATCGCCATGGCGCTCGCCTGCAA
GCCGCAACTGCTGATCGCCGACGAGCCGACCACGGCCCTCGACGTGACGACGCAGGCCGAGATTCTCGACCTGATTGCCC
GCCTGCAGAAGGCCAACGGCATGGCCGTCCTTTTCATAACGCATGATATGGGTGTCGTGGCGCAGATCGCCGATGACGTT
CTGGTCATGCATAACGGTGTCGCCAAGGAATATGCGCCGGTCGAGCAGATCTTTCACGCCCCGAAGGACGATTATACCCG
CATGTTGATTGGCTCGGTGCTGAAGCTGGAGCAGAAGGCGGAGATTCGCCTGGCACGGGCGCCGCTCGATCGGGCGGCGG
CGCCGATCCTGGAATTGCGTAATCTTTCGATGGATTTCGGCGAGGTAAAAGCACTCGACGACGTCTCCATTTCGCTGCTG
CCGGGCGAAACCCTCGGCATTGTCGGAGAGAGCGGGTCCGGTAAGACGACAATGGGCCGCTCGATCATGCGGCTGATCGA
TCCGACATCAGGCGAGATCCTCTATCGCCGCGCTGATGGCGGCATCATCGACCTGGCTACGGCAAAAGGCCAGACGCTTG
CGGCCGCGCGGCGCGAATTGCGTATGGTGTTCCAGGATCCCTTCGGCTCCCTCAATCCGCGCATGACCGTCTCCCAGATC
ATCGGCGAACCGCTGCTGGTCAACGGCATCGCCAAGGGACGGGCGCTGGACGAGCGCGTCTGCCACCTGATGGAGCAGGT
CGGCCTTGATCCAAGGGCGCGCGAACGTTATCCGCATGCCTTCTCCGGCGGTCAGCGCCAACGTATCGGCATTGCCCGCG
CCATTACGCTCAATCCGCGCGTCATCGTCGCCGATGAGGCGACTTCGGCGCTCGACGTCTCGGTGCGTTCGCAGGTGCTC
GATCTCCTGATGCGCCTGCAGGACGAACTCGGGCTCGCCTATATCTTCATCAGCCACGACATCGGTGTCATCCGCTACAT
GTGCGACCGCGTCGGCGTCATGTACAAGGGCCAACTCGTCGAAATCGGCGAGGCGGAGAAAGTCTGCCGCACGCCGGAGC
ATGCTTACACACAGGCGCTCATATCGGCCATTCCGCGGCCCGATCCACGCGACCGCGATCATTCGCGGCGCTTCCGCTAC
GTCGCTCCCGATAATCTGAAGAACGGGAGCTCTCAGCGATGA

Protein sequence :
MTDIVPIAGRPLLEVKNLTVEFPLRTGVFRAVSDLSFTIEPGKTLCVVGESGSGKSVTARSILQIVDTPGRIAGGSITLN
HPKGGSIDLTSLNPRGRQIRAIRGRDIAMIFQEPMSSLSPIHTVGNQIIEALRLHTRMSKAEARVEAISLLKQVEIPAPE
KALDRYAFQYSGGMRQRAMIAMALACKPQLLIADEPTTALDVTTQAEILDLIARLQKANGMAVLFITHDMGVVAQIADDV
LVMHNGVAKEYAPVEQIFHAPKDDYTRMLIGSVLKLEQKAEIRLARAPLDRAAAPILELRNLSMDFGEVKALDDVSISLL
PGETLGIVGESGSGKTTMGRSIMRLIDPTSGEILYRRADGGIIDLATAKGQTLAAARRELRMVFQDPFGSLNPRMTVSQI
IGEPLLVNGIAKGRALDERVCHLMEQVGLDPRARERYPHAFSGGQRQRIGIARAITLNPRVIVADEATSALDVSVRSQVL
DLLMRLQDELGLAYIFISHDIGVIRYMCDRVGVMYKGQLVEIGEAEKVCRTPEHAYTQALISAIPRPDPRDRDHSRRFRY
VAPDNLKNGSSQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-77 41
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-77 41
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-77 41
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-77 41
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-93 41