|
Name : RHE_PE00345 (RHE_PE00345) Accession : YP_472507.1 Strain : Genome accession: NC_007765 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 379404 - 381260 bp Length : 1857 bp Strand : + Note : Similar to AGR_L_3112p [Agrobacterium tumefaciens] and SMc03268 [Sinorhizobium meliloti]; Similar to swissprot:Q8UAV5; location:bacterial cytoplasm Psort-Score: 0.0717 DNA sequence : ATGGGCAGCGTCCAAGCACAATCGATCGAGACCGCCATCCCCGTCCTTTCCGTCGAGGGGCTGACGACGTCCTTTCTAGT CGATGGCGCCTGGAAGCCCGTTGTCCGCGACGTCTCCTTCACCGTAGCGCCCGGCGAAACCGTGGCGATCGTCGGCGAAT CCGGCTCGGGCAAGAGCGTCACGTCGCTGTCGATCATGCGGCTGCTACAGGCGGAGGTGAGCCGCATCGAGGGCCGCGTC ATGCTCGGCGGCCGCGATCTCCTGGCCTTGCCGGAACATGCCATGCGGCAGGTGCGCGGCAATGAGGTGGCGATGATCTT CCAGGAGCCGATGACATCGCTCAATCCGCTCTTCACCATCGGCGACCAGATTTCCGAAGCGCTGCTCTGCCATTCCGATA TGAGCCGGGCCGAGGCCAGGGCTGAGACGACCAGGCTCCTGGAAAAGGTCCGGATCCCCTCCGCCGCCTCGCGTTTCGAT GAATATCCGCATCGTTTTTCCGGCGGCATGCGCCAGCGGGTGATGATCGCCATGGCGCTCGCCAGCCGGCCGAAGCTCCT GATCGCCGACGAGCCGACGACGGCGCTCGACGTGACGATCCAGGGCCAGATCCTCGATCTCATCAAAATGCTGCAGGAAG AGGAGGGGACCTCCGTTTTTTTCATCACCCATGACATGGGCGTCGTCGCCGAGATCGCCGACAGGACGGTGGTGATGTAT CGCGGCGAACAGGTCGAAAGCGGCGCCACCGCCGATATCTTCCACCGCGGCAGACATCCCTACACACGGGCGCTGCTGTC GGCCGTGCCGGTGCTCGGCTCGATGCAGGGCCGGCAGAGGCCGCTGCGTTTTCCCGTGGTCAACACGGCGACGGGCGAAT CGGACGTCCCCGCCGAGGCAGCCGATACGGTGGCAGTGACGCCCGTCCTGGAGGTGAAGAACCTCACCAAGCGCTTCGAC ATCCACTCCGGCCTGTTCGGCCGGCTGACGAGCCGCGTGCACGCGGTCGAAAACGTCTCTTTCGATCTCCATGCCGGCGA GACGTTGTCGCTCGTCGGTGAATCCGGCTGCGGCAAATCGACGACAGGGCGGGCGATCATGCGCCTGATCGAGCCGCAGG CCGGTTCGGTGCTCGTCGAGGGCAGGGAGGTGCTCGGCCTCGACAGGAAGGAGCTGCGCGAAATGCGCAAATCCGTGCAG ATGATTTTCCAGGATCCCTTCGCCAGCCTCAATCCGCGCATGACGGTGGGTGCTGCGATCGCCGAACCCTATCTCGAGCA CAGGATGGGCAATGCGAAACAGGCAAAGGAGGTCGTCGCCGATCTCTTGGTGAAGGTTGGCCTCTCCCCGGATATGGCGG CGCGCTACCCGCATGAATTTTCCGGCGGCCAGCGCCAGCGCATCTGCATCGCCCGGGCGCTCGCCCTGCAACCGAAGGTC ATCGTTGCCGACGAAAGCGTTTCGGCGCTCGACGTCTCGATCAAGGCGCAGGTCATCAACCTGATGCTCGACCTGCAGCA GAGCCTCAACCTCGCCTTCCTGTTCATCTCCCATGACATGGCGGTGGTCGAGCGTGTCAGCCACCGCGTGGCGGTGATGT ATCTCGGCGAGATCGTCGAGATCGGCCCGCGCGCCGCCATCTTCGAAAATCCGCAGCACCCTTATACGAAGAAACTCATC GCCGCCGTGCCGGTGCCCGATCCCGACCGCCGCCACGAAAAGCGCATGGTGGCGAACGACGAGATCAAGAGCCCGATGCG CCCGATCGACTATGCCCCTCCGAAAGCCTCCTATCGCGAGGTCGGGCCGGGCCATCTGGTTATGGCCGATCGCTCCTCCG GACTGGGAGTTGCCTAA Protein sequence : MGSVQAQSIETAIPVLSVEGLTTSFLVDGAWKPVVRDVSFTVAPGETVAIVGESGSGKSVTSLSIMRLLQAEVSRIEGRV MLGGRDLLALPEHAMRQVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCHSDMSRAEARAETTRLLEKVRIPSAASRFD EYPHRFSGGMRQRVMIAMALASRPKLLIADEPTTALDVTIQGQILDLIKMLQEEEGTSVFFITHDMGVVAEIADRTVVMY RGEQVESGATADIFHRGRHPYTRALLSAVPVLGSMQGRQRPLRFPVVNTATGESDVPAEAADTVAVTPVLEVKNLTKRFD IHSGLFGRLTSRVHAVENVSFDLHAGETLSLVGESGCGKSTTGRAIMRLIEPQAGSVLVEGREVLGLDRKELREMRKSVQ MIFQDPFASLNPRMTVGAAIAEPYLEHRMGNAKQAKEVVADLLVKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKV IVADESVSALDVSIKAQVINLMLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAIFENPQHPYTKKLI AAVPVPDPDRRHEKRMVANDEIKSPMRPIDYAPPKASYREVGPGHLVMADRSSGLGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 7e-109 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-80 | 41 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-80 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-80 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-80 | 41 |
