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Name : gabDc (RHE_PC00032) Accession : YP_471966.1 Strain : Genome accession: NC_007764 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 28140 - 29594 bp Length : 1455 bp Strand : + Note : Similar to swissprot:Q92TE2; location:bacterial inner membrane Psort-Score: 0.1213; Similar to gabD1 (SMc02780) [Sinorhizobium meliloti] DNA sequence : ATGAAACTCAATGATCCCTCGTTGTTCCGTCAGGCATGCCCCATCGCTGATCGCTGGATCGAAGCGGAAGGTCGCGCGTC GGCCATGGTCCGCAATCCGGCGACAGGGGAGGTGCTGGGTTCGGTCCCTGATTTCGGTGCGGCGGAAACGGAAGAAGCCA TCGCCGCCGCAGTCGTTGCTCAGAAGCTTTGGGCGAAGAAGACCGCCGGTGAGCGCGCAACCGTGCTCAAGACATGGCAC CGCCTGATGATCGAAAACCGCGACGATTTGGCGATGATCCTGACGCTAGAACAGGGAAAACCGCTTGCTGAAGCCAAGGG GGAAATCACCTATGGTGCGAGCTTCATCGAATGGTTCGCCGAGGAGGCACGACGCATCAACGGCGAGATCGTACCGGGAC ATCAGCCGGACAAGCGGATCCTCGTGCTGCGCCAGCCGGCCGGCGTGGTGGCGGCGATCACGCCCTGGAATTTTCCGAAT GCGATGATCACCCGCAAGATCGGCCCCGCGCTTGCCGCCGGCTGCGCCGTCGTTCTCAAGCCGGCGCTGCAGACGCCGTT CTCCGCCATCGCGATCGCCGTCCTCGCTGAGCGCGCCGGCCTGCCGGCGGGGCTCCTCAACATTGTCACAGGTGACGCAG CCGCAATCGGCGGGGCGCTGACCGCCAGCCGCGACGTCCGGGTCCTGACCTTCACCGGCTCCACCCGGACGGGCGAGCTG CTTTATCGGCAATGTGCGCCGACGATCAAGAAGCTCGGCCTCGAGCTCGGCGGCAATGCACCCTTCATCGTGTTCGACGA CGCCGATCTCGACGCGGCTGTCGAAGGCGCCATCATCGCCAAGTTCCGCAACAACGGTCAGACCTGCGTCTGCGCCAACC GGCTTTATGTCCAGGACGGCGTCTACGAGGCATTTGCAGCCAAGCTCGCGGAGGCCGTTTCAAAGTTGAAGGTCGGCAAC GGTCTGGAGCGTGACGTCGTGCTTGGCCCGCTCATCGACGACAATGCGGTTGCCAAGGTCGAAAGCCATATTCAGGATGC CGTGGCAAAGGGTGCCGGGATCGTAACGGGAGGCAAGCGCCACGCGCTTGGCGGCCATTTCTTCGAGCCGACCATTCTGC GTGACGTTGCCGCCGGCATGCAGGTGGCGCGTGAAGAAACGTTTGGACCTCTTGCGCCGCTTTTCCGGTTCCGCGACGAG CAGGACGTCATCGAGCAGGCAAATGACACCGAGTTCGGCCTTGCCTCCTATTTTTACGCGCGCGATCTATCGCGGGTCTT CCGCGTGGCCGAAGCGCTCGAATATGGAATGGTCGGGGTCAACACCGGTCTTGTCTCCACCGCGGAGGCGCCATTCGGCG GCGTCAAGATGTCGGGTCTCGGCCGCGAAGGCTCCAGGCACGGATTGGACGAATATACCGAGCTCAAATATGTATGCCTG GGCGGCATTGCCTGA Protein sequence : MKLNDPSLFRQACPIADRWIEAEGRASAMVRNPATGEVLGSVPDFGAAETEEAIAAAVVAQKLWAKKTAGERATVLKTWH RLMIENRDDLAMILTLEQGKPLAEAKGEITYGASFIEWFAEEARRINGEIVPGHQPDKRILVLRQPAGVVAAITPWNFPN AMITRKIGPALAAGCAVVLKPALQTPFSAIAIAVLAERAGLPAGLLNIVTGDAAAIGGALTASRDVRVLTFTGSTRTGEL LYRQCAPTIKKLGLELGGNAPFIVFDDADLDAAVEGAIIAKFRNNGQTCVCANRLYVQDGVYEAFAAKLAEAVSKLKVGN GLERDVVLGPLIDDNAVAKVESHIQDAVAKGAGIVTGGKRHALGGHFFEPTILRDVAAGMQVAREETFGPLAPLFRFRDE QDVIEQANDTEFGLASYFYARDLSRVFRVAEALEYGMVGVNTGLVSTAEAPFGGVKMSGLGREGSRHGLDEYTELKYVCL GGIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-142 | 62 |
