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Name : lpsB1 (RHE_PB00001) Accession : YP_471772.1 Strain : Genome accession: NC_007763 Putative virulence/resistance : Virulence Product : galactosyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG2148 EC number : - Position : 277 - 843 bp Length : 567 bp Strand : + Note : similar to lpsB1 [Rhizobium etli] and BH3716 [Bacillus halodurans]; Similar to entrez-protein:AAB66671.1; location:bacterial inner membrane Psort-Score: 0.6816 DNA sequence : ATGGGCTTGAAACGGGCGGTGGATTTTCTCCTGGCTTTGATAGCTTCGGTCATCCTGCTCGTTCCGATCCTTGTCGTCGC TCTTAGTGTCCGGCTAACATCACCAGGACCGATCCTCTACTGGTCAAAACGTATCGGGCGTTTCAATCAGATCTTCCTGA TGCCGAAATTCCGCAGCATGCGCGTCGACACGCCGACAGTCGCGACACATCTGCTCGAAAACCCTGAGCGGTTTCTGACG CCCATCGGCTCGTTTCTGCGCAAATCCAGTCTCGACGAACTGCCCCAGCTCTGGTGCATTCTGGCGGGCAAGATGAGTTT CGTCGGGCCGCGCCCGGCGCTCTACAATCAATATGATCTGATCGAATTGCGGACGGTCTACGGCGTCGACAAACTGCTGC CCGGATTGACAGGTTGGGCGCAGATCAACGGGCGTGATGAATTGCCAATTCCGGAGAAGGTGAAATTCGATGTCGAATAT CTTGAGCGACGCTCCCTCGGTTTCGACATGCGCATCCTGTTTCTGACGGCCGAGAAGGTCGTTCGCCGTAAGGGAATAAA GCACTAG Protein sequence : MGLKRAVDFLLALIASVILLVPILVVALSVRLTSPGPILYWSKRIGRFNQIFLMPKFRSMRVDTPTVATHLLENPERFLT PIGSFLRKSSLDELPQLWCILAGKMSFVGPRPALYNQYDLIELRTVYGVDKLLPGLTGWAQINGRDELPIPEKVKFDVEY LERRSLGFDMRILFLTAEKVVRRKGIKH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1N | AAL26667.1 | type 8 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-29 | 50 |
| SSP0070 | YP_300160.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 8e-31 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lpsB1 | YP_471772.1 | galactosyltransferase | VFG1369 | Protein | 7e-30 | 52 |
| lpsB1 | YP_471772.1 | galactosyltransferase | VFG1309 | Protein | 3e-32 | 47 |
