Gene Information

Name : RHE_PA00008 (RHE_PA00008)
Accession : YP_471604.1
Strain :
Genome accession: NC_007762
Putative virulence/resistance : Unknown
Product : IS21 family insertion sequence ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 10044 - 10781 bp
Length : 738 bp
Strand : -
Note : Similar to Y4pL [Rhizobium sp. NGR234], TRm23b [Sinorhizobium meliloti] and blr8220 [Bradyrhizobiumjaponicum]; Similar to entrez-protein:P55617; location:bacterial cytoplasm Psort-Score: 0.0642

DNA sequence :
ATGCTTGCACATCCCACCCTTGATAAATTGAATGCCATGGGCCTGACCGGCATGGCCAAGGCGTTCAACGAACTGATCAG
CAACGGCGAGAGCGAACAACTCTCCCATGCCGAATGGCTCGGGCTGCTGCTCGAACGAGAATGGAGCTCGCGCCACGATC
GCAAGCTTGCCGCCCGTCTGCGGTTTGCCAAACTGCGCCACCATGCTGTGCCTGAGGATGTCGATTACCGCAGCGAGCGC
GGTCTCGATCGGGCGCTGTTCATGAAGCTGATCGGCGGCGACTGGATCGATGCCCACGACAACCTCGCGATCTGCGGGCC
ATCTGGCGTCGGAAAAAGCTGGTTGGCCTGTGCGCTCGGGCACAAGGCTTGCCGCGATGATCGCTCGGTTCTCTATCAGC
GCGTGCCGCGGCTGTTTGCCAATCTTGCTCTCGCTCACGGCGATGGCCGCTATGCAAGGCTGCAGCGAACCCTCGGGCAC
GTCCAGCTCTTGATCCTCGATGACTGGGGTCTGGAACCGCTCAACGAGCAGGCTCGCCACGACCTTCTGGAGATCCTCGA
GGATCGCTACGGCCGCCGCTCGACAATCATTACCAGTCAGCTTCCGGTATCAGCCTGGCATGAGATCATCGGCAACCCAA
CCTACGCCGATGCCATCCTCGATCGCCTCGTTCACAACGCCCATCGCATAGACCTATCCGGGGAAAGCTTGCGGCGAAAT
CAGCGCCGGAAATCTTGA

Protein sequence :
MLAHPTLDKLNAMGLTGMAKAFNELISNGESEQLSHAEWLGLLLEREWSSRHDRKLAARLRFAKLRHHAVPEDVDYRSER
GLDRALFMKLIGGDWIDAHDNLAICGPSGVGKSWLACALGHKACRDDRSVLYQRVPRLFANLALAHGDGRYARLQRTLGH
VQLLILDDWGLEPLNEQARHDLLEILEDRYGRRSTIITSQLPVSAWHEIIGNPTYADAILDRLVHNAHRIDLSGESLRRN
QRRKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAC39295.1 hypothetical protein Not tested LPA Protein 2e-43 46
ORF_5 AAZ04416.1 putative transposase subunit Not tested PAI I APEC-O1 Protein 2e-43 46
APECO1_3529 YP_854246.1 ISEc12 ATP-binding protein Not tested PAI I APEC-O1 Protein 8e-43 45
VPI2_0004c ACA01821.1 IstB protein Not tested VPI-2 Protein 1e-40 44