|
Name : RHE_PA00101 (RHE_PA00101) Accession : YP_471692.1 Strain : Genome accession: NC_007762 Putative virulence/resistance : Unknown Product : IS66 family insertion sequence transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 109976 - 111610 bp Length : 1635 bp Strand : - Note : Similar to y4hP [Rhizobium sp NGR234 pNGR234a]; Similar to entrez-protein:NP_443892.1; location:bacterial cytoplasm Psort-Score: 0.1381 DNA sequence : ATGGATGATGCTGCTTCGGAGATAGCCAGACTGCGCGCCGCGCTTGCGGCATCGGAAGCGCGTGCCGCCTCTGCCGAGGC CGACCTCGCACAGGTGCGCGCGGTCGTGACGACGTCTGAGGCGATGATCCGGCATCTCAAGCTCGAGATCGCCAAGATAC GTCGCGAGCAGTACGGCCAGAGCTCGGAGCGCCGCGCCCGGCTGATCGAGCAAATGAAATTGCAGCTCCAAGAACTTGAA GCCGACGCCACCGAAGACGAGATCGCTGCGGAACGCGTGGCGACGAGAATCACAAATGTCTCCGCTTTCGAACGCCGCCG GCCGGCCCGCAAGCCGTTTCCCGAGCACCTGCCGCGCGAGCGCCTGGTCATCGATGCCCCGTCGACCTGCACCTGCTGCG GCTCGCCCCGCATCGTGAAGATGGGCGAAGACATCACCGAGACGCTGGAGATCATTCCGCGCCAGTGGAAGGTGATCCAG ACGGTTCGCGAGAAGTTCACCTGTAGGGACTGCGAGAAGATCAGCCAGCCACCGGCCCCTTTCCATGCGACACCGCGGGG ATGGGCAGGACCGCACCTGCTGGCGACGATCCTGTTCGAGAAGTTCGGCCAACATCAGCCATTGAACCGCCAGGCTGAGC GCTACGCCAGGGAAGGCGTCGCTCTCAGTCTCTCCACACTGGCCGATCAGGTCGGAGCCTGCACGACGGCCCTGCAGCCG ATCCATGACCTGATCCGTGCCCATGTTCTGGCCGCCGAGCGGCTGCATGGTGACGACACCACCGTGCCGCTTCTGGCCAG GGGAGCAACAAAGCAGGCGAGGCTCTGGACTTACGTCCGCGATGACCGCCCTTTCGCGGGCGGCGCGCCTCCCGCCGCAC TCTTCCACTTCTCTCCCGATCGCGAGAAGACCCACCCCAACACGCATCTCGCCGGATGGCACGGCACCCTGCAAGCCGAT GCCTATGGCGGCTACAACGACCTCTATCGTGTCGACCGCCGCCCCGCGCTGGTGATCAGCGCACTTTGCTGGAGCCACGC GCGGCGCAAATTCTTCGAACTCGCTGACATCGCCGGCAACGTGCGCAAGGGCAAACCTGCCCACGAGATATCGCCCGTCG CGCTTGAGGCCGTTGCCCGCATCGACGCGCTCTTCGACATCGAGCGCGGCATAAACGGAATGCCTGCCGAGGATAGGCTC GCAGCGAGGCTGCAACATGCTCGCCCGCTCGTCGAAGAACTGCACGATTGGCTCATGGCCCAGCGCGGGCAAATGTCGAA GCACAACCCCGTCGCCAAGGCGATCAACTACATGTTCGAGAAGGAGGGTCGCTGGGAAGCCTTCGCCCGGTTCCTCGACG ACGGCAGACTGTGTCTGACGAACAATGCCGCCGAACGAGCCCTGCGCGGCGTTGCTCTCGGAAGAACGGCATGGCTATTC GCCGGTTCCCAGCGCGGAGGCGAGCGTGCTGCCTTCATGTATTCCCTAATCGTCACGGCAAAGATGAACGATATCGATCC GCAGGCCTGGTTGGCGGACGTGCTCGCCCGCATGCCTGGCATTCCCGTATCACGGCTGCCGGAACTGTTGCCGTGGAACT TGCCCGCCGGAAGCGCCCGGCAGGTGGCGGCCTGA Protein sequence : MDDAASEIARLRAALAASEARAASAEADLAQVRAVVTTSEAMIRHLKLEIAKIRREQYGQSSERRARLIEQMKLQLQELE ADATEDEIAAERVATRITNVSAFERRRPARKPFPEHLPRERLVIDAPSTCTCCGSPRIVKMGEDITETLEIIPRQWKVIQ TVREKFTCRDCEKISQPPAPFHATPRGWAGPHLLATILFEKFGQHQPLNRQAERYAREGVALSLSTLADQVGACTTALQP IHDLIRAHVLAAERLHGDDTTVPLLARGATKQARLWTYVRDDRPFAGGAPPAALFHFSPDREKTHPNTHLAGWHGTLQAD AYGGYNDLYRVDRRPALVISALCWSHARRKFFELADIAGNVRKGKPAHEISPVALEAVARIDALFDIERGINGMPAEDRL AARLQHARPLVEELHDWLMAQRGQMSKHNPVAKAINYMFEKEGRWEAFARFLDDGRLCLTNNAAERALRGVALGRTAWLF AGSQRGGERAAFMYSLIVTAKMNDIDPQAWLADVLARMPGIPVSRLPELLPWNLPAGSARQVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 2e-81 | 45 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 4e-86 | 43 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 2e-84 | 42 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 1e-84 | 42 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 2e-84 | 42 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 1e-84 | 42 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 3e-85 | 42 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 3e-85 | 42 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 2e-85 | 42 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 3e-85 | 42 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 5e-78 | 42 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 6e-85 | 42 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 2e-85 | 42 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 2e-74 | 42 |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 4e-75 | 41 |
| unnamed | AAL08460.1 | unknown | Not tested | SRL | Protein | 1e-60 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RHE_PA00101 | YP_471692.1 | IS66 family insertion sequence transposase | VFG0793 | Protein | 1e-85 | 42 |
| RHE_PA00101 | YP_471692.1 | IS66 family insertion sequence transposase | VFG1051 | Protein | 7e-61 | 41 |
