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Name : ctaD (RHE_CH00953) Accession : YP_468491.1 Strain : Rhizobium etli CFN 42 Genome accession: NC_007761 Putative virulence/resistance : Unknown Product : cytochrome-c oxidase, subunit I protein Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : - Position : 1001567 - 1003267 bp Length : 1701 bp Strand : + Note : similar to ctaD (SMc00010) [Sinorhizobium meliloti], coxA (Atu0768) [Agrobacterium tumefaciens str.C58] and mlr7491 [Mesorhizobium loti]; Similar to swissprot:Q92RG9; location:bacterial inner membrane Psort-Score: 0.4312 DNA sequence : ATGGCTGGACCTTCCGCTCACGACGATCATTCTCACGCCCGCCACGACCATGCGCATGATGATCACGATCACCATGATCA CGGGCACAAGCCGAGCTTTGTCAATCGCTGGCTGTTCTCGACCAACCACAAGGACATCGGCACGCTCTACCTGATCTTCG CGATCATCGCCGGCATCATCGGCGGCGCGCTGTCGGTGGCCATGCGCATGGAGCTGCAGGAGCCGGGCATCCAGATCTTC CACGGCCTGGCCTCGATGGTCTACGGCTATGAGGGCGATGCCGCCATCGACGGCGCCAAGCAGATGTTCAACATGTTCAC GACGGCGCACGCGCTGATCATGATCTTCTTCATGGTGATGCCGGCGATGATCGGCGGTTTCGCCAACTGGATGGTGCCGA TCATGATCGGCGCCCCCGACATGGCCTTCCCGCGCCTGAACAACATCTCCTTCTGGCTGATCGTTCCGGCCTTCGCGCTG CTCCTGCTGTCGATGTTCGTCGAAGGCCCGGCAGGCGCTTACGGTACGGGCGGCGGCTGGACGATGTATCCGCCGCTGGC AACGAGCGGCACGCCGGGACCGGCGGTCGACCTGGCGATCTTCGCGCTCCACATTGCCGGCGCCTCGTCGATCCTTGGTG CGATCAACTTCATCACCACGATCCTCAACATGCGCGCCCCCGGCATGACGCTGCACAAGATGCCGCTCTTTGCCTGGTCG GTGCTGATCACCGCCTTCCTGCTGCTGCTGTCGCTGCCGGTTCTGGCAGGCGGCATCACCATGCTGCTGACGGACCGCAA CTTCGGCACCTCGTTCTTCTCGCCGGAAGGCGGCGGTGACCCGATCCTCTACCAGCACCTGTTCTGGTTCTTCGGTCACC CCGAGGTCTATATTCTCATCCTGCCGGGCTTCGGCATGATCAGCCACATCATCTCGACCTTCTCGAAAAAGCCGATCTTC GGTTATCTCGGCATGGCCTACGCCATGGTCGCGATCGGCGCCGTCGGCTTCGTCGTCTGGGCCCACCATATGTATACGGT CGGTCTGTCGCTCGATGCGCAGCGCTACTTCGTCTTCGCCACGATGGTCATCGCCGTTCCGACGGGCGTGAAGATCTTCT CCTGGATCGCGACGATGTGGGGCGGGTCGATCTCGTTCCGCACCCCGATGATCTGGGCGATCGGCTTCATCTTCCTGTTC ACGGTCGGCGGCGTCACCGGCGTCCAGCTTGCCAATGCCGGTCTCGACCGCTCGCTGCATGACACCTATTACGTCGTGGC TCACTTCCACTACGTTCTGTCGCTCGGTGCCGTCTTCGCGATCTTTGCCGGCTGGTATTACTGGTTCCCGAAGATGACCG GCTACATGTACAACGAATTCCTCGGCAAGCTGCATTTCTGGGTCATGTTCATCGGCGTCAATCTGGTGTTCTTCCCGCAG CACTTCCTCGGCCTCGCAGGCATGCCGCGCCGCTACATCGATTATCCGGATGCCTTTGCCGGCTGGAACTATGTTTCCTC GATCGGCTCCTACATCTCGGCCTTCGGCGTGCTGATCTTCCTCTTCTCGGTCTTCGAGGCCTTCGCCAAGAAGCGCATCG CCGGTGAAAATCCGTGGGGCGAAGGTGCGACGACGCTGGAATGGCAGCTGCCTTCGCCGCCGCCCTACCACCAGTGGGAG CAGTTGCCGCGCATCAAGTAA Protein sequence : MAGPSAHDDHSHARHDHAHDDHDHHDHGHKPSFVNRWLFSTNHKDIGTLYLIFAIIAGIIGGALSVAMRMELQEPGIQIF HGLASMVYGYEGDAAIDGAKQMFNMFTTAHALIMIFFMVMPAMIGGFANWMVPIMIGAPDMAFPRLNNISFWLIVPAFAL LLLSMFVEGPAGAYGTGGGWTMYPPLATSGTPGPAVDLAIFALHIAGASSILGAINFITTILNMRAPGMTLHKMPLFAWS VLITAFLLLLSLPVLAGGITMLLTDRNFGTSFFSPEGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISTFSKKPIF GYLGMAYAMVAIGAVGFVVWAHHMYTVGLSLDAQRYFVFATMVIAVPTGVKIFSWIATMWGGSISFRTPMIWAIGFIFLF TVGGVTGVQLANAGLDRSLHDTYYVVAHFHYVLSLGAVFAIFAGWYYWFPKMTGYMYNEFLGKLHFWVMFIGVNLVFFPQ HFLGLAGMPRRYIDYPDAFAGWNYVSSIGSYISAFGVLIFLFSVFEAFAKKRIAGENPWGEGATTLEWQLPSPPPYHQWE QLPRIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 2e-90 | 46 |
