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Name : gabDch (RHE_CH00092) Accession : YP_467645.1 Strain : Rhizobium etli CFN 42 Genome accession: NC_007761 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 101411 - 102895 bp Length : 1485 bp Strand : - Note : similar to GabD [Rhizobium sp. NGR234] and gabD2 (SMb21185) [Sinorhizobium meliloti]; Similar to entrez-protein:P55653; location:bacterial inner membrane Psort-Score: 0.1107 DNA sequence : ATGGCTTTCACCACCGCACTGACCAGGCACGTTGCCTTTTCCTCGCCGCTGCTGCGCGATGCCGGCTATATCAACGGCGT CTGGACGCCGGGCGACGCCGCCGCAAAGACCTTCGATGTGCTGAACCCGGCAACCGGCGAGCTGCTCGCCTCCCTGCCCG ATATGGGCGCAGCCGAAACGCGAGCGGCGATCGATGCGGCCTATGCCGCCCAGCCGGCCTGGGCTGCCCGCCCGGCCAAG GAACGCAGCCAGATCCTGCGCAAATGGTTCGACCTGATAGTCGCCAATGCCGATGCGCTCGCGGCGATCCTGACCGCCGA AATGGGCAAGCCCTTCCCCGAAGCGCGCGGTGAGATCCTTTATGCCGCCGCCTATATCGAATGGTATGCGGAAGAGGCCA AGCGCATTTACGGCGAGACGATCCCGGCGCCGTCCCAGGACAAGCGCATGATCGTCATCAAGCAGCCGGTCGGCGTCGTC GGTACGATCACGCCGTGGAATTTCCCGGCGGCGATGATTGCCCGCAAGATCGCGCCGGCGCTTGCCGTCGGCTGCACTGT CGTGTCGAAGCCGGCCGAGCAGACGCCGCTGACGGCGATTGCCCTTGCCGTGCTCGCCGAACAGGCCGGCATTCCGGCCG GCGTCTTCAATCTCATCGTCGGGCTCGATGGCCCGGCGATCGGCCGCGAGCTCTGCGGCAATGACAAGGTGCGCAAGATC AGCTTCACCGGCTCGACCGAGGTCGGCCGTATCCTGATGCGGCAATGCGCCGACCAGATCAAGAAGGTGAGCCTGGAGCT CGGCGGCAACGCGCCGTTTATTGTCTTCGATGATGCTGATCTCGACGCTGCCGTCGAGGGCGCGATCGCCTCCAAATATC GCAATGCCGGCCAGACCTGCGTTTGCGCCAACCGCCTCTATATCCAGTCCGGCGTCTATGACGCCTTTGCCGCGAAGCTT GCCGCCAAGGTCGCCGACATGTCGGTCGGCGACGGGTTCAGGCCCGGTGTCGAGATCGGGCCACTGATCGACGAGCAGGG TCTTGCGAAGGTGGAGGACCATGTCGGCGACGCAGTTGCCAAGGGCGCCAAGATTCTGACCGGCGGCAAGCGCATCGACG GCGCCGGCACCTTCTTTGCGCCGACAGTGCTGACCGGCGTCACCCGCGATATGACGGTGGCGCGCGAGGAAACCTTCGGG CCGGTGGCGCCGCTCTTCCGCTTCGAGACGGCCGAGGACGTCATCACTCAGGCCAATGATACGGAATTCGGCCTGGCCGC CTATTTTTATGCCGGCGACCTCAAGAAGGTCTGGCGGGTGGCGGAAGCACTCGAATACGGGATGGTCGGCATCAATACCG GGCTGATGTCGTCGGAGATGGCGCCATTCGGCGGCATCAAGCAATCGGGTCTCGGCCGCGAGGGCTCGCGCCACGGCGCC GACGATTATCTGGAGATGAAATATCTCTGCATTGGCGGCCTCTGA Protein sequence : MAFTTALTRHVAFSSPLLRDAGYINGVWTPGDAAAKTFDVLNPATGELLASLPDMGAAETRAAIDAAYAAQPAWAARPAK ERSQILRKWFDLIVANADALAAILTAEMGKPFPEARGEILYAAAYIEWYAEEAKRIYGETIPAPSQDKRMIVIKQPVGVV GTITPWNFPAAMIARKIAPALAVGCTVVSKPAEQTPLTAIALAVLAEQAGIPAGVFNLIVGLDGPAIGRELCGNDKVRKI SFTGSTEVGRILMRQCADQIKKVSLELGGNAPFIVFDDADLDAAVEGAIASKYRNAGQTCVCANRLYIQSGVYDAFAAKL AAKVADMSVGDGFRPGVEIGPLIDEQGLAKVEDHVGDAVAKGAKILTGGKRIDGAGTFFAPTVLTGVTRDMTVAREETFG PVAPLFRFETAEDVITQANDTEFGLAAYFYAGDLKKVWRVAEALEYGMVGINTGLMSSEMAPFGGIKQSGLGREGSRHGA DDYLEMKYLCIGGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-119 | 61 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 1e-65 | 41 |
