Gene Information

Name : RHE_CH03884 (RHE_CH03884)
Accession : YP_471357.1
Strain : Rhizobium etli CFN 42
Genome accession: NC_007761
Putative virulence/resistance : Unknown
Product : oxidoreductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 4115762 - 4116514 bp
Length : 753 bp
Strand : -
Note : similar to SMc02486 [Sinorhizobium meliloti]; Similar to swissprot:Q92LJ9; location:bacterial cytoplasm Psort-Score: 0.0706

DNA sequence :
ATGAGCGATACACCTGTTGTTCTCGTGACCGGCGGAAGCCGGGGCATCGGCGCGGCCGTCTGCCGGCTCGCTGCGCGCCA
GGGCTGGCGTGTCGGGGTGAATTATGCCGCCAACCGCGAAGCGGCGGATGCTGTCGTTGCGGCGATCACCGAAAGCGGTG
GCGAAGCTGTGGCGATCCCGGGAGATGTCGGCAATGCTGCCGATATCGCCGCGATGTTTTCGGCGGTTGATCGTCAATTC
GGACGGCTCGACGGACTGGTCAACAATGCCGGCATCGTCGACTACCCGCAGCGGGTCGACGAGATGTCGGTCGAGCGGAT
CGAGCGCATGCTGCGCGTCAATGTGACCGGCTCGATACTCTGCGCTGCCGAGGCCGTGCGCCGCATGTCGCGCCTATATA
GTGGGCAGGGCGGGGCCATCGTCAACGTCTCCTCGATGGCGGCAATCCTCGGTTCGGCGACGCAGTATGTCGATTATGCG
GCATCGAAAGCGGCGATCGACACCTTCACCATCGGACTGGCGCGCGAGGTCGCCGCGGAAGGGATTCGCGTCAATGCCGT
CAGGCCCGGCATCATCGAAACCGATCTCCATGCATCCGGTGGGCTGCCGGACCGGGCGCGCGAAATGGCGCCATCGGTCC
CGATGCAGCGGGCCGGCATGCCGGAGGAGGTGGCGGATGCAATCCTCTATCTGCTTTCACCGTCGGCGTCCTATGTCACC
GGATCGATCCTCAATGTGAGCGGCGGCCGTTAG

Protein sequence :
MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF
GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYA
ASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVT
GSILNVSGGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 2e-46 50
orf29 AAO17195.1 Orf29 Not tested tcd island Protein 2e-44 49