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Name : lpsL (RHE_CH03247) Accession : YP_470738.1 Strain : Rhizobium etli CFN 42 Genome accession: NC_007761 Putative virulence/resistance : Virulence Product : UDP-glucuronic acid epimerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0451 EC number : - Position : 3414996 - 3416012 bp Length : 1017 bp Strand : + Note : similar to lpsL (SMc02640) [Sinorhizobium meliloti]; Similar to entrez-protein:O54067; location:bacterial cytoplasm Psort-Score: 0.0994 DNA sequence : ATGCGCTACTTCATTACAGGCACTGCCGGCTTTATCGGTTTTCATCTGGCCAGGCGCCTGCTGCAGGAAGGGCATGAGGT GACGGGCTTCGACGGCCTCACTCCTTATTACAATGTCAAGCTCAAAGAGATGCGGCACGCGGCACTCTCTCAGTTTCCGG CCTTCCGACCTGTCATATCAATGCTTGAGGACCGGCCGGCACTGGAGGCGGCAGTCTCCGCGGCCGCGCCTGACATCCTG ATCCATCTCGCCGCGCAAGCCGGAGTCCGCTACAGCCTGGAAAATCCTGAAGCGTATATACATTCGAACGTCGAAGGCTC GTGGAACATCATGGAAATCGCCCGGCGGGTTGAAGTCCGCCATCTGATGCTGGCCTCGACATCATCGATCTATGGCGCCA ACGCGACTGTCCCCTTCCGCGAGACCGATCGCGCCGACGAGCCGCTGACCATCTATGCCGCGACGAAGAAATCGATGGAA TTGATGGCGCACAGCTATGCCCATCTCCACAAGATTCCGACGACGGCCTTCCGTTTCTTCACCGTCTATGGCCCATGGGG CCGGCCCGATATGGCGCTGTTCAAATTCGCCAAGAACATGCTCGAAGGCCAGCCGATCGAGATCTACGGCGAAGGCAATA TGAGCCGCGACTTCACCTATATCGACGACCTCATCGAAGCGATCGTCAGGTTGTCGGCAATTGCCCCGAGCGAGGAAAAT CGCCTCGGTGACGCTGGGATCGAAACGCTTTCGCGCCAGGCGCCCTTCCGCGTCGTCAATATCGGCGGCGGTCAGCCCGT CAGCCTGATGGATTTCGTGGAGACGGTGGAAAAAGCGCTCGGCCGTCGTGCTATTCGCAAGATGCTGGCAATGCAGAAGG GTGACGTGCCGCGCACCTTCGCGGCTCCCGATCTTCTCGTGGCACTGACGGGATACAAGCCAGACACGACACTGGATGTC GGCGTCGAGGCCTTCGTCGACTGGTATATCGATGTGCGTCGCGAACTGGATGCCTGA Protein sequence : MRYFITGTAGFIGFHLARRLLQEGHEVTGFDGLTPYYNVKLKEMRHAALSQFPAFRPVISMLEDRPALEAAVSAAAPDIL IHLAAQAGVRYSLENPEAYIHSNVEGSWNIMEIARRVEVRHLMLASTSSIYGANATVPFRETDRADEPLTIYAATKKSME LMAHSYAHLHKIPTTAFRFFTVYGPWGRPDMALFKFAKNMLEGQPIEIYGEGNMSRDFTYIDDLIEAIVRLSAIAPSEEN RLGDAGIETLSRQAPFRVVNIGGGQPVSLMDFVETVEKALGRRAIRKMLAMQKGDVPRTFAAPDLLVALTGYKPDTTLDV GVEAFVDWYIDVRRELDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-78 | 50 |
