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Name : rkpK (RHE_CH03238) Accession : YP_470729.1 Strain : Rhizobium etli CFN 42 Genome accession: NC_007761 Putative virulence/resistance : Unknown Product : UDP-glucose 6-dehydrogenase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1004 EC number : 1.1.1.22 Position : 3404415 - 3405722 bp Length : 1308 bp Strand : + Note : similar to rkpK (SMc02641) [Sinorhizobium meliloti] and Exo5 [Rhizobium leguminosarum]; Similar to entrez-protein:O54068; location:bacterial periplasmic space Psort-Score: 0.7488 DNA sequence : ATGATTGGATCAGGCTATGTCGGCCTCGTTTCAGGCGTTTGCTTTGCGGATTTCGGCCACGACGTCATCTGCGTCGACAA GGATCTGAGCAAGATCGAGGCCCTTCGCGAGGGCCGTATTCCGATTTACGAGCCGGGTCTCGATCAACTGGTTGCTGAAA ACACCAGCACTGGCCGCCTGTCGTTCTCGACGGATGTCGGCGAAAGCGTTCGTGGCGCCGACGTCGTTTTCATCGCGGTC GGTACGCCGTCCCGTCGCGGCGACGGCCATGCCGATCTCTCCTACGTCTATGCGGCTGCGCGCGAGATTGCCACCTATGT GGAGGGCTTCACCGTCATCGTCACCAAGTCGACAGTACCGGTCGGCACCGGCGACGAGGTCGAACGCATCGTGCGGGAAA CCAATCCTTCGGCTGACGTCGCCGTCGTCTCCAATCCCGAATTCCTACGCGAAGGCGCAGCGATCGAGGATTTCAAACGT CCTGATCGGATCGTCGTCGGACTGAACGACGACCGGGCACGCGAGACGATGACCGAAGTCTATCGTCCGCTTTACCTCAA CCAGGCTCCCCTGGTCTTCACGAGCCGCCGCACCTCCGAGCTCATCAAATATGCGGCCAACGCCTTCCTCGCCATGAAGA TCACCTTCATCAACGAGATCGCCGATCTCTGCGAAAGGGTCGACGCAAACGTCCAGGACGTTTCGCGCGGCATCGGCCTC GATGGCCGTATCGGCTCCAAGTTCCTGCACGCCGGTCCGGGTTACGGCGGTTCGTGCTTCCCCAAGGATACGCTTGCCCT TGCCAAAACCGCGCAGGATTATGATGCACCGGTCCGTCTGATCGAAACGACGATCTCGATCAACGACAACCGCAAGCGGG CGATGGGCCGCAAGGTCATTTCGGCCGTCGGCGGAGACATTCGCGGCAAGAAAGTCGCCATCCTCGGACTGACCTTCAAG CCGAACACCGACGACATGCGCGACAGCCCGGCCATCGCCATCATCCAGACGCTGCAGGACGCCGGCGCCCAGGTCGTCGG CTATGATCCCGAGGGTATGGACAATGCCCGCAAGGTCATCGAGAACATCGAATATGCGAACGGCCCTTACGAAGCCGCTG CCGACGCCGATGCCCTCGTCATCGTCACCGAATGGAATCAGTTCCGCGCACTCGATTTCAATCGCTTGAAGCAGTCGATG CGCGCTCCGGTCCTGGTCGATCTGCGCAACATCTACCGCAGTGACGAGATCCGCAAACACGGCTTTACCTATACCGGGAT CGGGACCAACCTTTACCAGCACGCCTGA Protein sequence : MIGSGYVGLVSGVCFADFGHDVICVDKDLSKIEALREGRIPIYEPGLDQLVAENTSTGRLSFSTDVGESVRGADVVFIAV GTPSRRGDGHADLSYVYAAAREIATYVEGFTVIVTKSTVPVGTGDEVERIVRETNPSADVAVVSNPEFLREGAAIEDFKR PDRIVVGLNDDRARETMTEVYRPLYLNQAPLVFTSRRTSELIKYAANAFLAMKITFINEIADLCERVDANVQDVSRGIGL DGRIGSKFLHAGPGYGGSCFPKDTLALAKTAQDYDAPVRLIETTISINDNRKRAMGRKVISAVGGDIRGKKVAILGLTFK PNTDDMRDSPAIAIIQTLQDAGAQVVGYDPEGMDNARKVIENIEYANGPYEAAADADALVIVTEWNQFRALDFNRLKQSM RAPVLVDLRNIYRSDEIRKHGFTYTGIGTNLYQHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| udgA | YP_005682185.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 3e-63 | 42 |
| udgA | YP_003784334.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 3e-63 | 42 |
| udgA | YP_005686369.1 | UDP-glucose 6-dehydrogenase | Not tested | PiCp 7 | Protein | 3e-63 | 42 |
