Gene Information

Name : RHE_CH02680 (RHE_CH02680)
Accession : YP_470178.1
Strain : Rhizobium etli CFN 42
Genome accession: NC_007761
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2792521 - 2793333 bp
Length : 813 bp
Strand : -
Note : similar to all2584 [Nostoc sp. PCC7120] and RC198 [Ruegeria sp. PR1b]; Similar to swissprot:Q8YTX9; location:bacterial cytoplasm Psort-Score: 0.1709

DNA sequence : 
ATGCCATTGTCCTGTTCCGATCTTTCGGTGATGTACGGCCAGCGAAAGGCCCTTAACGGCTTCAGCCTTTCGCTCGAAAA
GGGCGAGATCCGGGCGCTGATCGGACCGAACGGCTCGGGCAAGAGCACGGCGCTGCATGCGCTGGCAGGACTGATCCGGC
CGGCCGGGGGCAAGGCGTCGCTGGATGGCGTTGCCATCGCTTCCATGTCCCGCCGCATGCTGGCAAAGAGGCTCGCCTTC
TTGCCGCAGCAGCCGACCGCGCCTGATGAAATGACTATCACCCAGCTCGTGCGCCAGGGCCGCTATCCGCATGTCGGCCT
GTTCCGCTCCTATGATAGCCGTGACGAAGACGCGATCGAATGGGCGCTCAAAAGCACCGGCCTGTCGGGGCTCGCCGACC
GCAGCCTGCGGGAACTGTCCGGCGGCGAACGGCAAAGGGCCTGGATATCGGCCGCCCTCGCGCAGGAAGCGGAGATCCTG
CTGCTCGATGAGCCGACCTCCTTCCTCGATATCGGCTATCAGGTTGAGGTGCTCGATCTCGTGCATCGGCTGAGCCGCGA
GAAGGGCGTGACGATCGTCATGGCAATCCACGATATCAACCAGGCGATCGCCGTCAGCGACCGCATCTCGCTGCTCGAAA
AGGGGCAGCTCAGATTCGACGGCGAGCCACGCGAGCTTGCCGAGCGCAACCTCGTCCAGGACATCTTCCGCGTCAGGGGT
CGTTTCGTCCAGGTCGCTCCGAACAATCCACCGCATTTCGATGCGGAGCTGATGCGGCTTCAGCCGGCAGCGTCTAGCGC
TTCACCAGCCTGA

Protein sequence : 
MPLSCSDLSVMYGQRKALNGFSLSLEKGEIRALIGPNGSGKSTALHALAGLIRPAGGKASLDGVAIASMSRRMLAKRLAF
LPQQPTAPDEMTITQLVRQGRYPHVGLFRSYDSRDEDAIEWALKSTGLSGLADRSLRELSGGERQRAWISAALAQEAEIL
LLDEPTSFLDIGYQVEVLDLVHRLSREKGVTIVMAIHDINQAIAVSDRISLLEKGQLRFDGEPRELAERNLVQDIFRVRG
RFVQVAPNNPPHFDAELMRLQPAASSASPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-35 43
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 5e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHE_CH02680 YP_470178.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 3e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RHE_CH02680 YP_470178.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 3e-33 42