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Name : serS (RHE_CH01826) Accession : YP_469346.1 Strain : Rhizobium etli CFN 42 Genome accession: NC_007761 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1913331 - 1914614 bp Length : 1284 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTCGATATCAAATGGATCCGTGAGAATCCCGAAGCGCTCGATGCCGCCCTTGCCAAGCGGGGCGCGGAGCCTTTGGC CCAAACTCTCGTCGCCCTCGATGAAAAGCGCCGCTCCGCCGTGCAGAAGACGCAGGATCTGCTCTCCCGCCGCAACGCCG CCTCCAAGGAGATCGGCGCAGCCATGGCGCAGAAGAACGCTGAGCTGGCCGAAAAGCTGAAGGCCGAGGTCGCCGAAATC AAGGAGACGCTGCCTGCAGCCGAAGAGGAAGAACGCACGCTGTCCGCCGAGCTCATTGACGCTCTCTCGCGCATCCCAAA CGTGCCGTTCGACGACGTTCCCGTCGGTAAAGATGAGCACGATAATGCCGTCGCCCGCATTGTCGGCGAAAAGCCGCGCT GGAACCATACGCCGAGGGAGCACTTCGAAATCGGCGAGGCTCTCGGCTATATGGACTTCGAGCGAGCCGCCAAGCTCTCC GGCTCGCGCTTCACGGTGCTGACCGGGCCGCTCGCCAGGCTCGAGCGCGCGCTCGGCCAGTTCATGATCGATCTCCACAC CCGCGAGCACGGTTATACCGAAGTCAGCTCGCCGCTGATGGTTCGGGCTGAAGCGGTGTTCGGCACCGGTAGCCTGCCGA AGTTCGAAGAGGATCTCTTCAAGACGACGGATGGCCGCTACCTCATTCCGACGGCGGAGGTGACGCTGACCAATCTGGTG CGCGAGGAAATCCTCGACCAGGAAAAGCTGCCGCTGCGCTTCACTGCCTTGACGCCGTCCTTCCGTTCGGAAGCGGGTTC GGCCGGCCGCGACACACGCGGCATGCTGCGCCAGCACCAGTTCTGGAAATGCGAGCTCGTCTCGATCACCGATGCCGAGA GCTCCATTGCCGAGCATGAACGGATGACCGCCTGTGCGGAGGAGGTGCTGAAGCGCCTCGGTCTGCATTTCCGCACGATG ACGCTGTGCACCGGCGACATGGGCTTCGGCTCGCGCAAGACCTACGATCTCGAAGTCTGGCTGCCGGGGCAGAATGCCTT CCGCGAAATCTCCTCCTGTTCGGTCTGCGGCGATTTTCAGGCCCGCCGGATGAATGCGCGCTACCGCGGCAAGGACGATA AGAACAACAAGTTCGTCCACACGCTGAACGGCTCCGGCACCGCCGTCGGCCGCTGCCTGATCGCCGTCCTAGAAAATTAT CTGAACGAAGACGGTTCCGTCACGATTCCGGACGTTTTGCTGCCCTATATGGGCGGATTGACCAAGATTGAACGGGCGGC CTGA Protein sequence : MLDIKWIRENPEALDAALAKRGAEPLAQTLVALDEKRRSAVQKTQDLLSRRNAASKEIGAAMAQKNAELAEKLKAEVAEI KETLPAAEEEERTLSAELIDALSRIPNVPFDDVPVGKDEHDNAVARIVGEKPRWNHTPREHFEIGEALGYMDFERAAKLS GSRFTVLTGPLARLERALGQFMIDLHTREHGYTEVSSPLMVRAEAVFGTGSLPKFEEDLFKTTDGRYLIPTAEVTLTNLV REEILDQEKLPLRFTALTPSFRSEAGSAGRDTRGMLRQHQFWKCELVSITDAESSIAEHERMTACAEEVLKRLGLHFRTM TLCTGDMGFGSRKTYDLEVWLPGQNAFREISSCSVCGDFQARRMNARYRGKDDKNNKFVHTLNGSGTAVGRCLIAVLENY LNEDGSVTIPDVLLPYMGGLTKIERAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-89 | 50 |
