Gene Information

Name : RHE_CH01517 (RHE_CH01517)
Accession : YP_469047.1
Strain : Rhizobium etli CFN 42
Genome accession: NC_007761
Putative virulence/resistance : Unknown
Product : nucleotide sugar transaminase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0399
EC number : -
Position : 1594870 - 1596030 bp
Length : 1161 bp
Strand : +
Note : similar to vioA (XCC1932) [Xanthomonas campestris pv. campestris str. ATCC 33913] and Reut4565 [Ralstoniametallidurans]; Similar to swissprot:Q8P9D3; location:bacterial cytoplasm Psort-Score: 0.2623

DNA sequence :
ATGTTCGTTCCAGGCTCAATTCCGAAATCGGGCCCAACTCTGGACGGCGTCATGAAAAACGAAAAGATCTATGTAACGAA
GCCCAGCCTGCCGCCGCTTGAAGAATTCATTCCTTCGCTGGAAGCGATCTGGAACAATCGCATCCTGACCAATGGCGGGC
CATTCCACGAGCAACTGGAGCAGGAGCTCTGCAACCATCTCGGCGTGAAGCACATCAGCCTCTTTTCAAACGCCACCGTT
GCGCTGCTGACGGCGCTTCAGGCGCTCCGCGTCACGGGCGAAGTCATCACCACGCCTTATTCCTTCGTGGCAACTTCGCA
TTCGCTTCTCTGGAACGGCTTAAAGCCCGTCTTCGTCGACATCGATCCGGTGACGCTCAATCTCGATCCAGCGAAGATCG
AGGCGGCGATCACGCAGCAGACGACGGCGATCATGCCGGTGCATTGCTACGGCCACCCTTGCGACGTCGATGCGATCCAG
AAGATCGCCGATCTCTACAATCTCAAGGTCATCTATGATGCCGCCCATGCCTTCGGCGTGGAGGACGAAAGGGGAAGCGT
TCTCAATCACGGCGACCTTTCCATCCTGAGCTTCCATGCGACGAAAGTTTTCAACACATTCGAAGGCGGGGCCATCATCT
GCCCTGATGTCAAGACGAAGACCCGCATCGACCAGCTGAAGAATTTCGGCTACGTCGATGAAGTGACCGTGGTGGCACCA
GGCACGAACGGCAAGATGAGCGAATTCAACGCTGCTCTCGGCCTGTTGCAGCTGAAATACATCAAGTTTGCACTCGAAAG
GCGTGAGCTCATCGATACTGCGTACCGCGAGCGGCTCCGCGGCGTAGCGGGCATAGAATGCCTGGACCGATCCGGCGAGA
CCGTCTCGAACTTCTCTTATTTCCCGATCCTCGTCCGCCCTGGCTATCCCATTTCACGCGATGGGCTCTATGAGTTACTG
AAGGAAAACGGCATTCATCCGCGCCGCTATTTCTATCCGCTGATTTCAAGCTTCTCGATGTATCGCAGCCTGCCTTCCGC
CCAGCCGTCGAACCTGCCGGTCGCAAGCGAAGCAGCACTCCAGGTGCTCTGCCTTCCCATCTATCCGGACATGGAGATGG
AGATCGTCGACAAGGTCTGTGGGCTGATCGAGTCGGTTTAA

Protein sequence :
MFVPGSIPKSGPTLDGVMKNEKIYVTKPSLPPLEEFIPSLEAIWNNRILTNGGPFHEQLEQELCNHLGVKHISLFSNATV
ALLTALQALRVTGEVITTPYSFVATSHSLLWNGLKPVFVDIDPVTLNLDPAKIEAAITQQTTAIMPVHCYGHPCDVDAIQ
KIADLYNLKVIYDAAHAFGVEDERGSVLNHGDLSILSFHATKVFNTFEGGAIICPDVKTKTRIDQLKNFGYVDEVTVVAP
GTNGKMSEFNAALGLLQLKYIKFALERRELIDTAYRERLRGVAGIECLDRSGETVSNFSYFPILVRPGYPISRDGLYELL
KENGIHPRRYFYPLISSFSMYRSLPSAQPSNLPVASEAALQVLCLPIYPDMEMEIVDKVCGLIESV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK15326.1 unknown Not tested Not named Protein 4e-114 68