Gene Information

Name : Adeh_0626 (Adeh_0626)
Accession : YP_463839.1
Strain : Anaeromyxobacter dehalogenans 2CP-C
Genome accession: NC_007760
Putative virulence/resistance : Virulence
Product : two component sigma54 specific Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 720992 - 722374 bp
Length : 1383 bp
Strand : +
Note : -

DNA sequence : 
ATGGCGAAGATCCTGGTGGTGGACGACGAGCAGTCGATGCGCGAGTTCCTCGAGATCCTGCTCCGCAAGCAGGGCCACGA
GGTGGTCGCGGCCGCGAGCCTCGAGGGCGCGCTCGCGTGCGCCGCCGATGGCGATCTCGATCTCGTGGTGTCCGACCTGC
GCCTGGGCGCGGAGAGCGGCATCCAGCTGCTCCAGGCGGTGAAGCGCGAGGCGCCCGGCACCGAGGTGATCATCCTCACC
GCGTTCGCGACCACCGAGAACGCCATCCAGGCGATGAAGCTCGGCGCCTACGACTACGTGCTGAAGCCCTTCAAGGTGGA
GGAGCTGAAGCTGGTGGTCGAGAAGGCGCTCGAGCGCCGGGGCCTGGTCGCCGAGAACCGGGTGCTGCGGCACACGGTGG
GCCGGCGTGGCGGCGACGGGCAGGACGCCGAGCTCATCGGGCGGTCTCCCGCCATCGAGGAGGTCCGCGCCCTCGTGGAG
AAGCTGGCGCGCACCCGGACCACGGTGCTCATCAGCGGCGAGAGCGGGACCGGCAAGGAGGTGGTGGCGCGCGCCATCCA
CGCCCGCGCCGGGCACCGGCAGCCGTTCGTCGCGATCAACTGCGGGGCGATCCCCGAGGGCCTGATCGAGAGCGAGCTGT
TCGGCCACCAGAAGGGCAGCTTCACCGGCGCGACCGAGGCGAAGGCGGGGCTCTTCGAGGTCGCCGGGGCCGGGACGCTG
TTCCTGGACGAGGTCGGCGAGCTGCCGCCGCCCGTGCAGGTGAAGCTCCTGCGCGCGCTGCAGGAGCGGAAGATCCGCCG
GGTGGGCGGGAGCGCCGACCTGGGCTTCTCCGCGCGCATCGTCGCCGCCACCAACCGCGACCTGGCCGAGGAGGTCCGGA
CGGGCCGGTTCCGCGAGGACCTCTACTACCGGCTCAACGTCATCCAGCTCCGCATGCCCGCCCTGCGCGAGCGGCGCGAG
GACCTGCCGCTGTTCGTCGAGCACTTCCTGGCGCGGTTCGCCGAGGAGCAGGGCCGGACGCGGCCGGCGCTGAGCTCCGA
GGCGGAGCGGCTGCTCCTGGCGCACGACTACCCCGGGAACGTGCGGGAGCTCGCCAACGTGGTCGAGCGCGCGCTCACCC
TCTGCGAAGGAGGCCGGATCCTCGCGGGGGACCTCCCGCCCGCCCTGCGCGGCGCGTCCGCGACCGCTTCGGCGGCGGGC
GCCCCTGCGCTGCCCGAGACCGGGATGGACCTCCAGGCGCATCTCGACGCGATCGAGCGCGCCCTGCTGGAGCAGGCGCT
GGAGCGCACCGGCGGCGTCAAGACCGAGGCCGCGCGCGTGCTCTCGCTCACCTTCCGCTCGCTGCGTTACCGCCTGGCCA
AGTTCGGGATCGCCGGCCGCTGA

Protein sequence : 
MAKILVVDDEQSMREFLEILLRKQGHEVVAAASLEGALACAADGDLDLVVSDLRLGAESGIQLLQAVKREAPGTEVIILT
AFATTENAIQAMKLGAYDYVLKPFKVEELKLVVEKALERRGLVAENRVLRHTVGRRGGDGQDAELIGRSPAIEEVRALVE
KLARTRTTVLISGESGTGKEVVARAIHARAGHRQPFVAINCGAIPEGLIESELFGHQKGSFTGATEAKAGLFEVAGAGTL
FLDEVGELPPPVQVKLLRALQERKIRRVGGSADLGFSARIVAATNRDLAEEVRTGRFREDLYYRLNVIQLRMPALRERRE
DLPLFVEHFLARFAEEQGRTRPALSSEAERLLLAHDYPGNVRELANVVERALTLCEGGRILAGDLPPALRGASATASAAG
APALPETGMDLQAHLDAIERALLEQALERTGGVKTEAARVLSLTFRSLRYRLAKFGIAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 4e-68 43
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 4e-68 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Adeh_0626 YP_463839.1 two component sigma54 specific Fis family transcriptional regulator BAC0089 Protein 2e-69 47
Adeh_0626 YP_463839.1 two component sigma54 specific Fis family transcriptional regulator BAC0467 Protein 3e-67 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Adeh_0626 YP_463839.1 two component sigma54 specific Fis family transcriptional regulator VFG1214 Protein 3e-80 47
Adeh_0626 YP_463839.1 two component sigma54 specific Fis family transcriptional regulator VFG0116 Protein 8e-51 47
Adeh_0626 YP_463839.1 two component sigma54 specific Fis family transcriptional regulator VFG1249 Protein 3e-56 44