Gene Information

Name : Adeh_0417 (Adeh_0417)
Accession : YP_463630.1
Strain : Anaeromyxobacter dehalogenans 2CP-C
Genome accession: NC_007760
Putative virulence/resistance : Virulence
Product : two component sigma54 specific Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 489616 - 491040 bp
Length : 1425 bp
Strand : -
Note : -

DNA sequence :
ATGGTCGTCCCCGATCCGCAGGAAGACCCGCGCGCGCCGCGGATCGCCGAGCCGCCCCCCGGCGGCAAGGTGCTCGTGGT
GGACGACCAGAAGAACATGCGCGCCACCACCGCCATCCTGCTCCGGCAGGCGGGCCACGCGGTGGAGGAGGCGGAGGACG
GCGCGTCCGCCACGCAGCGCGTGCAGCACGAGAGCTTCGACGTCGTGCTCACCGACCTGCGCATGCCCACGGTGGACGGC
ATGGAGGTGCTGCGGGCGGTGCAGCAGGCCTCGCCCGAGACGCAGGTCATCGTGATGACCGCGTACGGCACCATCGAGTC
GGCGGTGGAGGCGATCCGGCGCGGCGCGTACGACTTCCTGGCGAAGCCGTTCAAGGAGAGCGAGGTCCTGCTCCGCGTCT
CCAAGGCGCTGGAGAAGCGGCGGCTGCTCGGCGAGGTGAACCTGTTCGCCGAGGAGTTCCGCAAGCGCTACGGCCTGGAG
CACATCGTGGGCCGCTCGCCGGCCATGCGCGACGTGCTCGACCGCGTGCTGCGGGTCGCGCCCACCGACGCGACCGTGCT
CATCACCGGCGAGTCCGGCACCGGCAAGGAGCTGGTGGCGCGCGCGCTCCACGTCACCAGCCGCCGAAGCGACAAGCCGT
TCGTCCCGGTGAACTGCGCCGCCATCACCGACACGCTGCTCGAGTCGGAGCTGTTCGGGCACGCCCGCGGCGCCTTCACC
GGCGCCACCCGCGCCCGGCGCGGCCTGTTCGAGGAGGCGAACGGCGGGTCGCTGTTCATCGACGAGATCGGCGAGACCTC
CCCCGGCTTCCAGGCGAAGCTGCTGCGCGCGCTGCAGGAGGGCGAGATCCGCCGGGTGGGCGAGTCCAGCCCGGTGCAGG
TGAACGTGCGCATCATCGCCGCCACCAACCAGGACCTGCGCCGCGCCATCGCCGAGAGGCGGTTCCGGGAGGACCTGTTC
TACCGGCTGAACGTGGTGCCGCTGCGCATCCCGCCGCTGCGCGAGCGCCGCGAGGACGTCCCGCTGCTCGCCGCCCACTT
CCTGCAGCGCTTCGTGCAGCGCACCGGCAGCGAGCGCGTGCTCACCCCGGAGGCGGTGGCCTCCCTCGTGGCCCACGACT
GGCCCGGGAACGTGCGCGAGCTCGAGAACATCATCGAGCAGGCCGCCGCGCTCTGCACCGGGCGCGAGATCCGCGCCGCC
GACGTCCAGGTCGAGGCGCGCGCCGCGCCGGCGGCCGGCGCCGGGGTGACGCTCGCCGACGCGGTCGAGGACACCGAGCG
GCGGGCCATCACCGCCGCGCTGGTGCGCTGCGGCAACGACCTCGGCCGGGTGGCCCGCGACCTCGGCATCTCCGGCACCA
CGCTCTGGCGCAAGATGAAGCGGCTCGGCATCGAGGCCGGCGAGCACACCTCCGCCGGTCCCTGA

Protein sequence :
MVVPDPQEDPRAPRIAEPPPGGKVLVVDDQKNMRATTAILLRQAGHAVEEAEDGASATQRVQHESFDVVLTDLRMPTVDG
MEVLRAVQQASPETQVIVMTAYGTIESAVEAIRRGAYDFLAKPFKESEVLLRVSKALEKRRLLGEVNLFAEEFRKRYGLE
HIVGRSPAMRDVLDRVLRVAPTDATVLITGESGTGKELVARALHVTSRRSDKPFVPVNCAAITDTLLESELFGHARGAFT
GATRARRGLFEEANGGSLFIDEIGETSPGFQAKLLRALQEGEIRRVGESSPVQVNVRIIAATNQDLRRAIAERRFREDLF
YRLNVVPLRIPPLRERREDVPLLAAHFLQRFVQRTGSERVLTPEAVASLVAHDWPGNVRELENIIEQAAALCTGREIRAA
DVQVEARAAPAAGAGVTLADAVEDTERRAITAALVRCGNDLGRVARDLGISGTTLWRKMKRLGIEAGEHTSAGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-48 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-48 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Adeh_0417 YP_463630.1 two component sigma54 specific Fis family transcriptional regulator BAC0089 Protein 9e-76 52
Adeh_0417 YP_463630.1 two component sigma54 specific Fis family transcriptional regulator BAC0467 Protein 4e-72 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Adeh_0417 YP_463630.1 two component sigma54 specific Fis family transcriptional regulator VFG1249 Protein 6e-58 44
Adeh_0417 YP_463630.1 two component sigma54 specific Fis family transcriptional regulator VFG1214 Protein 4e-57 43
Adeh_0417 YP_463630.1 two component sigma54 specific Fis family transcriptional regulator VFG0116 Protein 3e-55 41