Gene Information

Name : Adeh_1391 (Adeh_1391)
Accession : YP_464602.1
Strain : Anaeromyxobacter dehalogenans 2CP-C
Genome accession: NC_007760
Putative virulence/resistance : Virulence
Product : ATPase FliI/YscN
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 1598154 - 1599512 bp
Length : 1359 bp
Strand : -
Note : -

DNA sequence :
GTGACGCTGCTCGATCGCGACGCCCTCGCCCGCGCGCTCGCCGCGGCGGACCCCACCCCGCTCACCGGGACGGTGGTGCG
CGCGGCCGGGCTGCTGGTCGAGGCGCTCCTCCCGCAGGTGCCGGTGGGGACGGCCTGCGAGATCCACGCGCGGGACGGCG
CGGTGGTGCTCGCGGAGGTGATCGGCTTCCAGGGCGGCACGGCGCGGCTCATGCCGCTGTCGGGGATCCAGGGCGTGGCG
GAGGGGTGCGTGGTGGTGCCGCGCGCCAGCGCGGACCGCATCCCGGTGGACGAGGCGCTCCTCGGGCGCGTGGTGGACGC
GTCGCTCCGGCCCGTGGACGGCGGCCCGGTGCCCATCCTGCGCCAGCGCACCGCGCTGCACGCCGCGCCGCCGCCCGCGC
TCTCCCGGCGCCGGGTGGAGCGCCCCGTCCCGCTCGGCATCCGCGCGGTGGACGCCTGCCTGACGGTCGGCGAGGGCCAG
CGCGTCGCGGTGATGGCCGGGCCGGGCGTGGGCAAGAGCGTGCTGCTCGGGATGCTGGCGCGCTCCGCCACCGCCGACGT
GGTGGTGGTCGGGCTCGTCGGCGAGCGCGGCCGCGAGGTGCGCGAGTTCGTGGAGCGCGACCTCGGGCCGGGCCTGGCGC
GCGCGGTGGTGGTGGTGGCCACCAGCGACGCCTCGCCGCTCGAGCGGCTGCGCGCCGCCATGGCGGCGACCGCGGTCGCC
GAATGGTTCCGCGGCCGCGGCCGGCGGGTGCTCCTGCTGGTGGACTCGCTGTCGCGCGTGGCGCAGGCCCAGCGCGAGAT
CGGCCTCGCCGCGGGCGAGCCTCCCACCACCCGCGGCTACCCGCCCTCCGCGTTCGCGATCCTTCCCCGCCTGGTCGAGC
GCGCCGGCAACGACGCCGGCCCGGGCAGCATCACCGCGTTCTACACCGTGCTGGCCGAGGGCGACGACCACGCCGGCGAC
CCCATCGCCGACGCGGCGCGCGCCACGCTGGACGGCCACCTGGTGCTGTCGCGCCGCCTGGCCGAGTCCGGCCACTTCCC
GGCCATCGACGTGCTGGCGTCGGTGTCGCGCGTGATGAACGACATCGTCCCGCCGGAGCACCGCGCGCTGGCACGCGAGG
CGCGCGAGGTGCTCTCCGCCCACCGCGAGGCGGCCGACCTGGTCGAGGTGGGCGCGTACGCGGCCGGGTCGAACCCGCGC
GTCGATCGCGCGCTCCGCTGCATCGAGCCGCTGCGGGCGTTCCTCCGGCAGGATCCGGCCGAGCGGACCCCCCTGCCCGA
GGCGCTGGACCGCCTCGCCCGCCTGCTGGCCCCGCCCCCGGCCGTCCCCGCCGCGAGGAAGGAGGCCGCGCATGGCTAG

Protein sequence :
MTLLDRDALARALAAADPTPLTGTVVRAAGLLVEALLPQVPVGTACEIHARDGAVVLAEVIGFQGGTARLMPLSGIQGVA
EGCVVVPRASADRIPVDEALLGRVVDASLRPVDGGPVPILRQRTALHAAPPPALSRRRVERPVPLGIRAVDACLTVGEGQ
RVAVMAGPGVGKSVLLGMLARSATADVVVVGLVGERGREVREFVERDLGPGLARAVVVVATSDASPLERLRAAMAATAVA
EWFRGRGRRVLLLVDSLSRVAQAQREIGLAAGEPPTTRGYPPSAFAILPRLVERAGNDAGPGSITAFYTVLAEGDDHAGD
PIADAARATLDGHLVLSRRLAESGHFPAIDVLASVSRVMNDIVPPEHRALAREAREVLSAHREAADLVEVGAYAAGSNPR
VDRALRCIEPLRAFLRQDPAERTPLPEALDRLARLLAPPPAVPAARKEAAHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-66 51
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-62 51
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 3e-61 51
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-62 51
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-60 51
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 5e-61 51
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-61 51
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-61 51
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-60 51
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-61 51
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 3e-59 50
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-51 48
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-55 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-55 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-55 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-55 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 3e-55 48
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-52 48
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-52 48
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-47 47
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-51 47
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-55 47
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-45 47
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-45 47
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 3e-54 45
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-51 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 6e-51 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 2e-51 44
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 5e-44 43
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-52 43
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 6e-52 43
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-53 43
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-53 43
escN AAC31513.1 L0034 Virulence LEE Protein 1e-53 43
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-52 43
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-53 43
escN YP_003223475.1 translocator EscN Virulence LEE Protein 5e-53 43
escN AAC38383.1 EscN Virulence LEE Protein 1e-53 43
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 3e-53 43
escN NP_290268.1 hypothetical protein Virulence LEE Protein 2e-53 43
escN AAK26715.1 EscN Virulence LEE Protein 4e-53 43
ECs4568 NP_312595.1 EscN Virulence LEE Protein 2e-53 43
escN AAL57542.1 EscN Virulence LEE Protein 4e-53 43
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-40 42
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 1e-40 42
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-40 42
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 1e-40 42
unnamed AAL06369.1 EscN Virulence LEE Protein 5e-52 42
invC AAS66861.1 InvC Not tested SSR-2 Protein 3e-46 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG0192 Protein 6e-67 53
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG2331 Protein 1e-66 52
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG1254 Protein 4e-68 52
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG2499 Protein 2e-61 51
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG0390 Protein 6e-64 50
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG0048 Protein 3e-66 49
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG0515 Protein 7e-56 48
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG2144 Protein 2e-61 46
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG2459 Protein 1e-45 44
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG0730 Protein 6e-54 43
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG0812 Protein 7e-54 43
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG0555 Protein 5e-41 42
Adeh_1391 YP_464602.1 ATPase FliI/YscN VFG1008 Protein 7e-47 41