Gene Information

Name : Adeh_1078 (Adeh_1078)
Accession : YP_464290.1
Strain : Anaeromyxobacter dehalogenans 2CP-C
Genome accession: NC_007760
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 1244807 - 1246348 bp
Length : 1542 bp
Strand : +
Note : -

DNA sequence :
ATGGCCGACGAACTTGGAACGACCGAGCGCGAGATCATCGCGCAGCGTCTGAAGAAGGCCGAGGCGCTCCGCGCCCTCGG
CGTGAACCCCTTCGGAAACGGCTGGCAGCCCCGCCACCTCGCGGAGGAGCTGCTGCGCCACCATGGCGACCAGCCCGCCG
AGGAGATCGCGAAGGCCCCGGGCGACTGGTCGCTCGCGGGCCGCGTCCTGGCGGTCCGCTCCTTCGGCAAGGCCGCGTTC
CTGCGCGTCCGCGACCGGTCCGCCGAGCTGCAGGTCTGGGTGAAGAAGGATCGCGTGGGCGACCAGGCGTTCGAGGTCTT
CAAGCTGCTCGACATCGGCGACATCGTGGGCGCGGAGGGCCCGGCCACCCGCACCAAGACCGGCGAGCTGACGCTCGAGG
CGCGGACGTTCACGATCCTCACCAAGGCGACGCGCCCGCTGCCGGAGAAGTGGCACGGCCTCACCGACGTGGAGCAGCGC
TACCGCCAGCGCTACGTGGACCTGGTGGTCACGCCGGGCGTGCGCGAGGCGTTCGTGAAGCGCGCCCGCATCGTCTCCGG
GATCCGCCGCTTCCTGGACGCCCGCGGGTACCTGGAGGTCGAGACGCCCACGCTGCACAAGCCGGAGGAGGCGGGCGGGG
CGGCGGCGCGGCCGTTCGAGACGCACCACAACGCGCTCGACCTCGACCTGAAGCTCCGCATCGCCACCGAGCTGCACCTG
AAGCGCCTCGTGGTGGGCGGCCTCGACCGCGTCTACGAGATCGGCCGCATCTGGCGCAACGAGGGGATCGACCGGCGCCA
CAACCCGGAGTTCACCTCCATCGAGTTCTACCAGGCGTACGCCACCCACGAGGACCTGATGCGCCTCACCGAGGAGCTGA
TGCACCAGCTCGCGGTGGAGGTGACCGGCGGGCCGGTGGTGACGTTCCAGGGCCAGGCCATCGACCTGACGCCGCCGTAC
CCGCGCGTCTCGATGCTGGAGGTGGGCGCGCGCGCGCTGGGGCTGGCGCCCGACGACGCGCTCGCCGGGCGCGGGCTCGC
CGAGGCGCTCTCGCGCGCGGCCGCCCGGGAGAACGACTCCGAGGACGCCTGGAAGCTGGAGCAGGCCGCGAAGAAGACGC
CGGGCGAGGCGGTGGCGCTCGCGTTCGAGATCTTCGGCGAGCCGCAGCTCCCGAAGGACCGGCCGGCCTTCGTGGTGGAC
TTCCCGCTGGAGACGAGCCCGCTGTCGCGCCGGCGCGACGCCGACCCGCGGCTGGTGGACCGCTTCGAGCTGTTCGCCGC
CGGGATGGAGCTCGCGAACGCGTTCTCCGAGCTGAACGACCCGGCCGACCAGCGCGCGCGCTTCGAGGCGCAGATGCGCG
CCAAGGCCGCCGGCGACGAGGAGGCCATGCCCTACGACGAGGACTTCGTCCGCGCGCTGGAGCACGGCATGCCGCCCACC
GCGGGCGAGGGGATCGGCATCGACCGGCTGGCCATGCTCTTCACCGACTCGGCGTCGATCCGCGACGTGATCCTGTTCCC
GCTGCTGAAGTCCCGCGACTGA

Protein sequence :
MADELGTTEREIIAQRLKKAEALRALGVNPFGNGWQPRHLAEELLRHHGDQPAEEIAKAPGDWSLAGRVLAVRSFGKAAF
LRVRDRSAELQVWVKKDRVGDQAFEVFKLLDIGDIVGAEGPATRTKTGELTLEARTFTILTKATRPLPEKWHGLTDVEQR
YRQRYVDLVVTPGVREAFVKRARIVSGIRRFLDARGYLEVETPTLHKPEEAGGAAARPFETHHNALDLDLKLRIATELHL
KRLVVGGLDRVYEIGRIWRNEGIDRRHNPEFTSIEFYQAYATHEDLMRLTEELMHQLAVEVTGGPVVTFQGQAIDLTPPY
PRVSMLEVGARALGLAPDDALAGRGLAEALSRAAARENDSEDAWKLEQAAKKTPGEAVALAFEIFGEPQLPKDRPAFVVD
FPLETSPLSRRRDADPRLVDRFELFAAGMELANAFSELNDPADQRARFEAQMRAKAAGDEEAMPYDEDFVRALEHGMPPT
AGEGIGIDRLAMLFTDSASIRDVILFPLLKSRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-94 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Adeh_1078 YP_464290.1 lysyl-tRNA synthetase VFG1668 Protein 6e-95 42