Gene Information

Name : SYN_01953 (SYN_01953)
Accession : YP_460836.1
Strain : Syntrophus aciditrophicus SB
Genome accession: NC_007759
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 806039 - 806671 bp
Length : 633 bp
Strand : +
Note : -

DNA sequence :

ATGATTAAAATCCTGATTGCCGATGATCATACCATCGTCAGGGAAGGGTTGAAACAGATTGTGGGAGACGTCGGCGACAT
GATGGTGGCCGATGAGGCCGGCAACGGACAGGAAGCACTGCAGAAAATTCGGGAAAAGGATTATGATGTCGTCCTGCTGG
ATATTTCCATGCCGGGGCGCAGCGGCCTGGAAGTTCTGAAGGATATACGGGCGGAGCGGCCGAAACTGCCCGTCCTGATC
CTGAGCATGCATTCCGAAGAACAGTATGCCGTCCGGGCGCTCCGGGCCGGCGCGTCGGGCTATCTGACGAAGGCGAGCGC
TCCCGATGAGCTGATCGGGGCGATCCGCAAGGTATCCCGGGGGCGCAAATACGTAACGGCATCGCTGGCGGAAAAACTGG
CTCTGGAACTGGATGCCGATATCCGGAAACCGCCCCACGAGATACTTTCCGATCGGGAATATCAGGTCATGCTCATGCTG
GCTTCAGGGAAAACCGTCACGGAAATCGCCGAAGAGCTGTGTCTCAGCGTAAAGACCATCAGCACGTATCGCTCCCGGAT
TCTGGAAAAAATGAACATGAAAAAAAACGCGGAGCTGACACTTTACGCGGTTCAGAATCACCTTGTGGACTGA

Protein sequence :

MIKILIADDHTIVREGLKQIVGDVGDMMVADEAGNGQEALQKIREKDYDVVLLDISMPGRSGLEVLKDIRAERPKLPVLI
LSMHSEEQYAVRALRAGASGYLTKASAPDELIGAIRKVSRGRKYVTASLAEKLALELDADIRKPPHEILSDREYQVMLML
ASGKTVTEIAEELCLSVKTISTYRSRILEKMNMKKNAELTLYAVQNHLVD

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
hrpY	AAD24683.1	response regulator HrpY	Virulence	Hrp PAI	Protein	9e-37	44

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
SYN_01953	YP_460836.1	response regulator	VFG1889	Protein	1e-36	41