Gene Information

Name : SYN_00222 (SYN_00222)
Accession : YP_463129.1
Strain : Syntrophus aciditrophicus SB
Genome accession: NC_007759
Putative virulence/resistance : Unknown
Product : glutamate racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0796
EC number : 5.1.1.3
Position : 3098234 - 3099046 bp
Length : 813 bp
Strand : -
Note : converts L-glutamate to D-glutamate, a component of peptidoglycan

DNA sequence :
ATGAATAAAAATTCGCCTGAACTTCACCCCATCGGTGTTTTTGATTCCGGCGTCGGCGGGTTGACTGTTGTCCGGGCCTT
GATGGAAAGGCTGCCTTTCGAAAATATCCTTTACTTCGGAGATACGGCCCGGGTGCCCTACGGCGTGAAATCCGTGGAAA
CCATCAATGCCTATGCCCGGCAGATCACGGAATTTCTGCTCCGTCAGGAAGTCAAGCTCCTCATCATTGCCTGTAACACG
ATGGCCGCCGTGGCCCGCCAGTCCGTCGAGTCTCTTTCCCCTGTTCCGGTTCTCGATGTCATCGATGCCGGCGCCCGCCG
TGCCGTGGCGGAAACCCGGACGCACTCCGTGGGGGTCATCGGCACGCCTACCACGATCAACAGCAATGCCTATGCCCGGG
CCATCTGCCGGCTGGCGCCGGAAACCCGCATCTTTTCGCAGGCCTGTGCCCTGCTTGTCCCCCTGGTGGAGGAAGGCTGG
CTCGACCATCCCGTCACCCGCCTGACCGCTCAGGAATACCTGCGGCCCGTGCTCGCCGAACACATCGATACCCTGGTCCT
CGGTTGCACCCATTATCCCCTGCTCAAGGCGCTTCTGCAGGATGTTGCCGGCCCGGACATTCACCTGGTGGATTCCGCCG
AGGCGATGGCCGATGCAACCGCCGAGCTGTTGCAGGTTCAACATCTCACCAACCCCGAACGTATCCCTCCGGAATACCGT
TTCTACGTAACGGACGTCCCCCTCCGCTTTCAGCAGATCGGCGAGCGTTTCCTCGGCCGGTCCCTGCCCGGCGTCGAACG
GGTCCAATTGTAG

Protein sequence :
MNKNSPELHPIGVFDSGVGGLTVVRALMERLPFENILYFGDTARVPYGVKSVETINAYARQITEFLLRQEVKLLIIACNT
MAAVARQSVESLSPVPVLDVIDAGARRAVAETRTHSVGVIGTPTTINSNAYARAICRLAPETRIFSQACALLVPLVEEGW
LDHPVTRLTAQEYLRPVLAEHIDTLVLGCTHYPLLKALLQDVAGPDIHLVDSAEAMADATAELLQVQHLTNPERIPPEYR
FYVTDVPLRFQQIGERFLGRSLPGVERVQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1468 YP_001800862.1 glutamate racemase Not tested Not named Protein 4e-45 41