|
Name : cvrA; nhaP2; ycgO (SYN_01080) Accession : YP_462844.1 Strain : Syntrophus aciditrophicus SB Genome accession: NC_007759 Putative virulence/resistance : Unknown Product : potassium/proton antiporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG3263 EC number : - Position : 2812995 - 2814476 bp Length : 1482 bp Strand : - Note : the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli DNA sequence : ATGATACCAATCGAATATATTCTACTGATAGGGTCGTTCCTTATTATCATCAGCATCGGCGTGGCAAGACTCTCCGAAAA TTTCGGCGTGCCTGTTCTGTTGCTGTTTTTAGGCATCGGAATGTTGGCCGGTTCAGAAGGGCCGGGCGGCATTTATTTTG ACGATGCCTATCTGGCTCAATCCATCGGTGTCATTGCCTTAGTCTTCATCCTGTTCGCGGGGGGCCTCGATACAGGTTGG CCTGAAGTCAAACCTGCCATTTGGCAGTCATTAAGCCTTGCCACGCTCGGTGTTTTTCTTACCGCCATTACTTTCGGTTT GTTTGCTGTTTTCGTTCTGAAATTTTCACTCCTCAGCGGACTGCTTCTCGGGGCGGTCGTTTCATCGACTGATGCCGCTG CAGTCTTCTCAGTGCTCCGATCCAAGAGCATCAGCCTCAAGGGCCAACTCAAGCCCCTGCTTGAGCTTGAATCAGGCAGC AATGATCCCATGGCGGTTTTTCTTACTATCGGCATCATTCAGATAATGACCATTTCGGGGACGTCATTCGGTTCCATTGC TTTTCTCTTTGTTATTCAAATGGGACTCGGTGTTGTTTCCGGCCTTGGTTTCGGAAAAATGATGGTCCTGATGCTCAATC GGTTGAAATCCCAATACGAAGGGTTCTATCCCGTTTTTGCCATGGCGGCGGCGTCATTCATTTTCAGTGCGACTACGGCT GCCGGAGGCAGCGGATTTCTTGCTGTTTACCTCGCGGGATTGCTTGCGGGCAACAGCGAGTTCGTTCACAAGAAAAGTTT GATGCGATTTTTTGATGGACTTGCCTGGCTCAGCCAGATCGCCCTGTTTCTCTCCCTCGGTCTGCTGGTCTTCCCTTCCA GAATCGTCCCTGTGATCTGGGTCGGCCTTGCCTGTTCGTTTTTCCTCATGTTTATAGCGCGTCCCGCGGGTGTGATGTTT TCACTGCTTTTTTCGCGGCTTAAGTCGCGAGAAAAGCTTCTTGTTTCCTGGGTTGGTTTGCGGGGAGCCGTCCCCATTGT TCTGGCAACCTTTCCCCTGCTGGCGGGGATAGCGGAAGCGGAGATGATTTTCAACATCGTTTTTTTCATTGTCCTTACTT CAGCCCTGCTTCAGGGTTGGTCCATTCCCGTTGTTGCCCGCTTCCTGCGACTCGATGCACCCCTTCAACCGAAGCGGCAA TATCCCATCGAGTACGCGCCGGTGGAGGGGGTCGACACGAAGCTCGTCGAGTTTGTCGTCCCCTTCAGGTCGGCAATTGC AGGAGAGCCGATTGTGGAACTGGGGCTTCCCCGTGGGACCCTCATTGTGCTCATAAACCGCGGTGGAAGCTTTCTCGTGC CAAGCGGGGGCACCGTCCTGGAAGAGGGAGATGTTCTCATGGTTCTTGCCAGAGAGAGAACCTTGCCCGAAGTCCGAGAG ATGCTGATGCGGCAGATGCCGAACGACGAGGGAGAAGCCTGA Protein sequence : MIPIEYILLIGSFLIIISIGVARLSENFGVPVLLLFLGIGMLAGSEGPGGIYFDDAYLAQSIGVIALVFILFAGGLDTGW PEVKPAIWQSLSLATLGVFLTAITFGLFAVFVLKFSLLSGLLLGAVVSSTDAAAVFSVLRSKSISLKGQLKPLLELESGS NDPMAVFLTIGIIQIMTISGTSFGSIAFLFVIQMGLGVVSGLGFGKMMVLMLNRLKSQYEGFYPVFAMAAASFIFSATTA AGGSGFLAVYLAGLLAGNSEFVHKKSLMRFFDGLAWLSQIALFLSLGLLVFPSRIVPVIWVGLACSFFLMFIARPAGVMF SLLFSRLKSREKLLVSWVGLRGAVPIVLATFPLLAGIAEAEMIFNIVFFIVLTSALLQGWSIPVVARFLRLDAPLQPKRQ YPIEYAPVEGVDTKLVEFVVPFRSAIAGEPIVELGLPRGTLIVLINRGGSFLVPSGGTVLEEGDVLMVLARERTLPEVRE MLMRQMPNDEGEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAB61290.1 | unknown | Not tested | PAI I CFT073 | Protein | 1e-41 | 41 |
| f536 | AAC61706.1 | F536 | Not tested | PAI I CFT073 | Protein | 1e-41 | 41 |
