Gene Information

Name : SYN_00853 (SYN_00853)
Accession : YP_462552.1
Strain : Syntrophus aciditrophicus SB
Genome accession: NC_007759
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2529168 - 2529881 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGATGGATTCCTCCGGACAACCCCTCATTGTCCTGAAAGGGGTGACCAAAATCTTCGGGAAGGGGCAGGCGGCGGTGGA
GGCGCTTCGCGGCGTGGATCTCCGCATCGATGCAGGCGAGTTCGTCGCGGTCATGGGACCGAGCGGCTCCGGCAAGTCCA
CCTGCATGAACATCCTCGGCTGTCTGGATACGCCAACGGCGGGGAGCTATCTCTTCAAGGGGGTGGAAGTCGGGGAATTG
AGCCGGAATTCGCGCGCCCTTTTGCGCCGCCACTACCAGGGATTCGTCTTCCAGGGATTTAATCTCCTGAACCGCACCTC
GGCGCTGGAAAACGTGGAACTGCCGTTGATCTATCGAGGCGCGACCGCCGCCGAGCGGAAGAGGCGCGCCCTGCAGGCCC
TGGAAACGGTGGGGCTCAAGGGATGGGAAACGCACACTCCCGGCGAACTGTCGGGAGGGCAGCAGCAGCGGGTCGCCATT
GCCCGGGCGATTGTGACCGGGCCGGAGGTCCTGCTGGCCGACGAACCAACGGGAAACCTGGATACGGCCCGCAGCCGGGA
GATCATGGAGCTGCTCACCCTTTTGAACCGCGACCCGGGGATTACGATCATCATGGTGACCCACGAACCGGACATGGCCG
CCTACGCAAAGCGCACCGTCCGGTTCCTGGACGGTCTTGTCGCGTCGGATGAGAGAAACGGGAGGCAAAACTGA

Protein sequence : 
MMDSSGQPLIVLKGVTKIFGKGQAAVEALRGVDLRIDAGEFVAVMGPSGSGKSTCMNILGCLDTPTAGSYLFKGVEVGEL
SRNSRALLRRHYQGFVFQGFNLLNRTSALENVELPLIYRGATAAERKRRALQALETVGLKGWETHTPGELSGGQQQRVAI
ARAIVTGPEVLLADEPTGNLDTARSREIMELLTLLNRDPGITIIMVTHEPDMAAYAKRTVRFLDGLVASDERNGRQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SYN_00853 YP_462552.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-53 52
SYN_00853 YP_462552.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-45 52
SYN_00853 YP_462552.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-35 42
SYN_00853 YP_462552.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-35 41