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Name : SYN_01549 (SYN_01549) Accession : YP_462275.1 Strain : Syntrophus aciditrophicus SB Genome accession: NC_007759 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2282134 - 2283798 bp Length : 1665 bp Strand : + Note : - DNA sequence : ATGACGATTACCCCAGAACTTGCCACACCTCATTCCATGGATAATGAAGTCCATCTCAATCCGGAAGAAGAAAAAATTGT CACCCAGGCCCAGGCATTGAATCTTCCCTTCTGGAGAGAAATGCCGACGGAGATCGCGGGTGTCGGATTCAACGGCCAGG TTCCTGTTCAATTCCTGAAGCGTCACAAGATCGTCCCCCTGGAAGCACATTCCTCCACGGTTATCGCGGTCAACAATCCT GCTTTCTTCGAACCCATCGACGACCTGAAGCGACTGCTGCAGAATCCGGATATCTCCATCGTTCTCGCTCCCGAATCCGC CATCCTTTTCGCCATCAAGCAGCTTTATGAACACGACCGCAGCACAGTGGAGGCCTTTGTCCAGACCTTCATGGATGACT CCTATGACCGGATTCTTTCAGAAATCGAAGAAACGGGGGATATTCTGGATGATGCGCACGAAGCGCCCATGATCCAGCTG GTCAACCTGATTCTCTCCCGGGCGATCCGGGACCGGGCCAGTGATATTCACATCGAACCCTATCAGAATTCCCTGAAGAT CCGGTATCGAATCGATGGAATGCTCAGCATTGCCATGGACCTGCCGCGCAAGGTGCACGCCGCCCTCGTTTCCCGTATCA AAATCATGGCCAGACTGGATATCGCGGAAAAGCGGCTTCCCCAGGATGGCCGTATCGATGCCAGGATCGGGAACCGAAGC GTGGATGTTCGAGTTTCCGTACTGCCGACGGCCTTCGGCGAACGTCTGGTTCTGCGCCTGCTGGACAAGACGCGCGCGCT GCTGCAATTGCCCGATCTTGGGTTCAATCCGCAAACAATAGGAATTTTCAACCGTCTGATTTCATCCCCCTATGGGATTA TTCTGGTAACCGGACCAACGGGAAGCGGCAAAACGACAACCCTTTACGCCCTCCTTTCCAATCTCAACAATTCGGAAATC AACATCATCACCATCGAAGACCCCATTGAATATCAGATTGACGGCATCGCCCAGATTCAGATCAACCCGAAAATTGATCT CTCGTTCGCCAACGGTCTGCGTTCCATCGTCCGGCAGGACCCCGATGTCATTCTTGTGGGAGAAGTCAGGGATAAAGAAA CAGCGGAAATAGCCATTCAATCGTCGCTTACCGGTCACCTGGTCCTCTCCACGCTCCATACCAACGATGCCGCCAGTGCG GTGACCCGCCTGATTGACATGGAAATCGAACCTTTTCTCATTACCTCATCGGTAATCGCCATCGTTGCTCAGCGGCTGGT CCGTGTCCTCTGCCCGCAGTGCAGACAGCCCTATATCCCGGACAGACAATCTTTAACCAATATCGGCCTGTCTCCGGAAA TGGCGGAGAACGCGACGATTTACAGAAAGGGCGGCTGTTCAGCCTGCATGAACACCGGCTACCACGGCAGAACAGCCATT ATGGAACTCATGGTGATGGAGGAATCGCTGAAGCACATGATCCTGAAAACATCGGATTCCAACGCGATTCACCAGGAAGC CGTGGAATGCGGGATGCTGCCTCTGCTCCAGGACGGCGCCCACAAGGTTCTGGAAGGGATCACAACCATAGAAGAAGTAC TCCGGGTCACACGCGTTTTGAAAACCCGCTCACGCAAGCGGACGGCCTCTCATCCCGGTGCATGA Protein sequence : MTITPELATPHSMDNEVHLNPEEEKIVTQAQALNLPFWREMPTEIAGVGFNGQVPVQFLKRHKIVPLEAHSSTVIAVNNP AFFEPIDDLKRLLQNPDISIVLAPESAILFAIKQLYEHDRSTVEAFVQTFMDDSYDRILSEIEETGDILDDAHEAPMIQL VNLILSRAIRDRASDIHIEPYQNSLKIRYRIDGMLSIAMDLPRKVHAALVSRIKIMARLDIAEKRLPQDGRIDARIGNRS VDVRVSVLPTAFGERLVLRLLDKTRALLQLPDLGFNPQTIGIFNRLISSPYGIILVTGPTGSGKTTTLYALLSNLNNSEI NIITIEDPIEYQIDGIAQIQINPKIDLSFANGLRSIVRQDPDVILVGEVRDKETAEIAIQSSLTGHLVLSTLHTNDAASA VTRLIDMEIEPFLITSSVIAIVAQRLVRVLCPQCRQPYIPDRQSLTNIGLSPEMAENATIYRKGGCSACMNTGYHGRTAI MELMVMEESLKHMILKTSDSNAIHQEAVECGMLPLLQDGAHKVLEGITTIEEVLRVTRVLKTRSRKRTASHPGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-95 | 46 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-95 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SYN_01549 | YP_462275.1 | general secretion pathway protein E | VFG0182 | Protein | 6e-104 | 52 |
| SYN_01549 | YP_462275.1 | general secretion pathway protein E | VFG2048 | Protein | 4e-96 | 46 |
| SYN_01549 | YP_462275.1 | general secretion pathway protein E | VFG1876 | Protein | 4e-94 | 44 |
| SYN_01549 | YP_462275.1 | general secretion pathway protein E | VFG2426 | Protein | 6e-71 | 44 |
| SYN_01549 | YP_462275.1 | general secretion pathway protein E | VFG1880 | Protein | 2e-80 | 41 |
