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Name : SYN_00497 (SYN_00497) Accession : YP_462086.1 Strain : Syntrophus aciditrophicus SB Genome accession: NC_007759 Putative virulence/resistance : Unknown Product : type I restriction-modification system restriction subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 2118210 - 2121341 bp Length : 3132 bp Strand : + Note : - DNA sequence : ATGACCAAACTATTTGAATCCGACGTCGAAGAATTCGTCATTGAGCTGTTGCAAAACCAAGACTTTGAGTATCTGTCCCC TGAACAGCAGGAAAATGAACGCGAAAGCCTATCCACCGTTATTTTCCGAGACCGCCTAAAGCAGGCCATTAATCAGATAA ATCCCAAAGTCCCTGCGCCAGCTAGGGAACAGGCCTTCAAACAGGTTTTCAACCTATCCAGCCAAAGCCTCATGGTCAAC AACGAGGCTTTCCATTTGATGCTCACCGAAGGGATCGAAGTCGAGTACATGGGAAAGAAGGGCATAAAAGGCGACAAGGT TTCTCTTATTGATTTTGAGAACATAGAAAACAACGAATTTCTCGTCTGCAACCAGTTTACGGTCATTGAGAACAACATAA ACAAAAGGCCTGATGTCGTAGTTTTCATAAACGGCCTGCCTCTGGTGGTTATCGAGCTTAAAAATCCCGCCGATGAGAAC GCCACCGTCCAGAAAGCCTTTACCCAGCTTCAGAATTACAAGAAGGCAATTCCGTCCCTCTTCCATTACAACAGTATCTT GATCGCTTCTGACGGTCTGGATGCCAAGACAGGAACGATATCTTCCGATATTTCCCGCTTTGTCGCTTGGAAATCGAAAG ACGGCTTCACCGAAGACAAGGAAACGGTCCCTCAGATTGAAACCATGGTCCGAGGAATGCTGAGCAAGGAAACCCTGATT GATCTGATCCGCCATTTCATAGTTTTCGAGAAAAGCAAGAAAGAAGACCTTGAAACCGGCCTTACTTCCGTCGTAGCCAT CAAGAAAATCGCCGCCTATCACCAGTATTATGCCGTTAATAAGGCTATCCAATCGACCCTGATTGCCTCCGGTACGGATG GGAACCGCAAGGCTGGCGTGGTCTGGCACACTCAAGGAAGCGGAAAATCCCTTTCCATGGTCTTTTATACCGGTAAAACT GTCTTCAAGCTCAACAACCCGACAGTTGTCGTCCTTACGGACAGGAATGACCTGGACGACCAGCTTTTTGATACGTTTGC AAGCTGCAAACAGCTTTTGAGACAAGAACCGGTCCAGGCGGAAAGCCGGGAGAGCCTGAAGAATCTCCTGAAAGTCGCCG GGGGCGGGATCGTATTCACGACCATCCAGAAATTCTTCCCCGAAAGCGGCGCAAGCGATTATGAGCAGTTATCCGAGCGG AAAAACATCATCGTCATCGCCGATGAAGCCCATCGGAGTCAATACGGTTTCGGAGCCAAGACTCGGATCGTAAAGAAGAA TGGGAAGGATGAAGAAGCGGTCACCCGCTACGGATTCGCCAAATACATGAGAGACGCCTTACCCAATGCCTCTTTCATAG GATTCACCGGGACGCCGATTGAGAAAGAAGACGCCTCAACACCGGCGGTCTTTGGCAATTATGTCGATGTCTATGATATC GCCCAAGCCGTGGAAGACGGGGCGACGGTCAAGATCTTCTATGAATCCCGTTTGGCCAAAGTCCATCTGAAACCGGAAGA AAGGGCCAAACTGGATGAAGAAGCGGAATCCATAGGCGAAGGCGAAGAAACCGCCAAAGAGAAAGCCAAGGCGAAGTGGG CGCAAATCGAAGCCATTGTCGGACATTCCGACAGGCTGAAAACGGTAGCGGCTGATATCATCGACCATTTTGAGAAGCGG CAGCAAGTTTTCGAAGGCAAGGGCATGATCGTCTGCATGAGCCGCAGGATCGCAGTGGAACTGTACGAGCAGATAATCGA GCTTCGGCCCGAATGGGAAAATGACGACTTGAAAAAGGGCTGCATCAAGGTGGTGATGACTTCCGCCTCATCCGATCCCG AAAAATGGCAAAAACACAGCACGACCAAGAAGGACCGCAAGGCCATTGCCGACAGGTTCAAAGACACAGCCGATCCCCTG AAATTGGTCATCGTCCGCGACATGTGGCTGACAGGCTTTGACGTTCCCTGCCTTCACACCATGTATGTCGACAAACCGAT GCGGGGCCACAACCTCATGCAGGCGATTGCCCGTGTGAACCGGGTTTTCAAAGACAAGCCCGGCGGATTGATCGTCGACT ATATCGGCATCGCATCGGATTTGAAGTCGGCTTTGGCGACATACACGGCCAGCGGCGGCAAAGGGACACCGACACTTGAT CAGGAAGAAGCGGTTGCCACGCTTCTTGAGAAATTTGAGATCGTTGAACAGATGTTCGATGGCTTTGATTACAAGGGATT CTTCACATCCAGCACGCAGGAGAAACTCATTCTCATCCTGGAAGCCCAGGAACATATTCTCGGCCTTGAGGATGGCAAGA ACCGGTTTACCAAACAAGTAAGCCTACTTTCCCAGGCCTTCGCCCTATCGGTTCCCCATCCTAAAGCCATGGAAATAAAG GATGAGGTCGGTTTCTTCCAAACCGTCAAAGCCCGCTTGGTCAAGTTTGAACCGACAGGTTCAGGTAAGTCTGATGCGGA AGTCGAAACGGCCATAAGGCAGATCGTGGACAAGGCTGTCGTGTCGGACGGCATTATCGATGTCTTTGACGCCGCAGGAA TCAAGAAACCCGATATCTCGATCCTGTCTGACGACTTCATGGAAGAAGTCCGCCATATGGAACGGAAGAATCTCGCGCTG GAACTGCTTAAGAAAATTTTAAACGATGAAATTAAGACCAGAACCAGAAAAAATCTCATCCAGAGCAAGAAGCTTTCCGA AATGCTGGAGAATGCTATCAACAAATACCAAAACAATCTTCTCACGACGGCCCAAGTTATCGAAGAATTGATCAAACTCG CCAAGGAATTCAAAGAATCCGACAAACGGGGGAAAGATTTGAATCTCAACGATGAGGAATTGGCCTTTTACGACGCATTG GCCAACAACGAAAGCGCCAAGCAAGTATTGGGGGATAAACAGTTGGCCGTGATTGCCATTGAAGTCTTCAATAGCATCAA AAGAAACGCGACGATAGACTGGACGCTCAAGGAAACGGTCAGAGCCAGGTTGAGACGAGATGTAAAAAGGATATTGAAAC GCTACGGTTATCCGCCGGACATGCAGTTATTGGCGACCGAGAATGTATTAAAACAGGCCGAATTAATGGCTGACGGGTTG ATGGCAGCTTGA Protein sequence : MTKLFESDVEEFVIELLQNQDFEYLSPEQQENERESLSTVIFRDRLKQAINQINPKVPAPAREQAFKQVFNLSSQSLMVN NEAFHLMLTEGIEVEYMGKKGIKGDKVSLIDFENIENNEFLVCNQFTVIENNINKRPDVVVFINGLPLVVIELKNPADEN ATVQKAFTQLQNYKKAIPSLFHYNSILIASDGLDAKTGTISSDISRFVAWKSKDGFTEDKETVPQIETMVRGMLSKETLI DLIRHFIVFEKSKKEDLETGLTSVVAIKKIAAYHQYYAVNKAIQSTLIASGTDGNRKAGVVWHTQGSGKSLSMVFYTGKT VFKLNNPTVVVLTDRNDLDDQLFDTFASCKQLLRQEPVQAESRESLKNLLKVAGGGIVFTTIQKFFPESGASDYEQLSER KNIIVIADEAHRSQYGFGAKTRIVKKNGKDEEAVTRYGFAKYMRDALPNASFIGFTGTPIEKEDASTPAVFGNYVDVYDI AQAVEDGATVKIFYESRLAKVHLKPEERAKLDEEAESIGEGEETAKEKAKAKWAQIEAIVGHSDRLKTVAADIIDHFEKR QQVFEGKGMIVCMSRRIAVELYEQIIELRPEWENDDLKKGCIKVVMTSASSDPEKWQKHSTTKKDRKAIADRFKDTADPL KLVIVRDMWLTGFDVPCLHTMYVDKPMRGHNLMQAIARVNRVFKDKPGGLIVDYIGIASDLKSALATYTASGGKGTPTLD QEEAVATLLEKFEIVEQMFDGFDYKGFFTSSTQEKLILILEAQEHILGLEDGKNRFTKQVSLLSQAFALSVPHPKAMEIK DEVGFFQTVKARLVKFEPTGSGKSDAEVETAIRQIVDKAVVSDGIIDVFDAAGIKKPDISILSDDFMEEVRHMERKNLAL ELLKKILNDEIKTRTRKNLIQSKKLSEMLENAINKYQNNLLTTAQVIEELIKLAKEFKESDKRGKDLNLNDEELAFYDAL ANNESAKQVLGDKQLAVIAIEVFNSIKRNATIDWTLKETVRARLRRDVKRILKRYGYPPDMQLLATENVLKQAELMADGL MAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 49 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 49 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 49 |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 47 |
