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Name : SYN_00458 (SYN_00458) Accession : YP_462044.1 Strain : Syntrophus aciditrophicus SB Genome accession: NC_007759 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 2076876 - 2078552 bp Length : 1677 bp Strand : - Note : - DNA sequence : ATGCACCTTTCGCAATTTTTGCAGGAAACCTGTCATCTGACGGATGAGGACCTCAAAAAAGCTCTGAAGCTTCAGAGGGA TTTGGGGGGGGAGCTCGGCCGCCTGCTGGTGCAGATCGGCGCCATGACCGAAAGTCAGCGGGTCGAGGCTTTGTCCTCGT ATCTCGACATTCCCCTGTATTCCGGCGGGGGGGCGATGGAGGATTCTCTGGCCGCCTTTCTCAGCAATCGCCTGGACTAT GATTTCCTGCTCAAAAACCACTTCATCCCCCTGGCGGTGGATCACGAAAGGAAACTCCTTGAGGCTCTGACCAGCGATCC TTTCAATTCCTCCATGTCCGATTACGTGGTCAAGAACCTTGGCTATGCCGTCCGCCTGATTCTCGCTCCGGAAAAAACCG TCGATGAACTGGCAAGGAGCTATCTGGACGGCCAGGATCGGGAGTTCGTATCCCTGGTCGTCGAAGAGGACGCGGAAAAA CTCAAGGAAATGGCCTTCGAGGCGCCGGTGATCAAGTACCTCAACAGCCTCCTGAACAAGGCCGTGGAAATGCGGGCCTC CGACATCCATATCGAGTCTTCGGAGAAGAAATACCGGGTCCGATTCCGGATCGACGGGATTCTGCACGACATCGATACGC TGGAGGAGGCGTTTTATCTGGCCACGGTTTCGCGCATCAAACTGCTGGCGGAACTGGACATCGCGGAAAAGAGGCTGCCT CAGGACGGAAAATTCACGACCCGAATCGCCTCGCTTTTTCTGGACATCCGCGTCTCCACTCTGCCCACGATCAACGGGGA AGGCGTGGTCCTGCGACTGCTCTATCGGGAAAAGGTTTCCCTGGATCTGGATTATCTGGGGCTGGATGCGGACCACAAAG CCGTTGCCGTGGAACTGATTTCCCACCCTTACGGAATGATCCTCGTGACCGGGCCGACCGGATCGGGGAAGAGCACGACC CTGTATTCCATGCTGACCCGCCTGAATCATCCGGACCGCAAGATCATTACCATCGAAGATCCGGTGGAGTACCAGCTGCA GGGGATCAATCAGATCCAGGTCCGCGGTGAAATCGGATTGACCTTTGCCGCCGCCCTGCGCTCCATTCTCCGCCATGACC CCGACATCGTGATGGTCGGTGAGATCCGCGATCGGGAAACGGCGGAAATCTCCATCCAGTCCGCCCTGACGGGGCACCTG GTCCTTTCGACCCTGCATACCAATGATTCCCCCAGCAGCCTCTTCCGTCTGATCGAAATGGGCATCGAAGACTACCTGCT GAACGCGGCCATCATCGGGGTCATGGCTCAGCGGATCATTCGGAAAAACTGTCCCTTCTGCAGCCGTCCCGATCCGGCGG CGGAACCACCGCTGCGGGAATACGGCCTTCATGAACTCGCCGAAAAGTACGCGCCCCTTCTGGAAGAGGGGATATCTCTC CGTCGCGGAGAGGGATGTCCTCAATGTGGGGAAACAGGCTATCGGGGGAGAATCGCCATCTTTGAACTCTTTGAATATAC TGATGATCTCAAGGAGATTCTTCTGAAAAAGCGGTCGCTGGAAGCCCTGCGCGCGGCCCTGACGGAACGGACGTCCTTTC GCCGGCTCCGGGAAGACGGCATCCTGAAGGTTGTCCGGGGAGAGACCACTCTTGAAGAAGTGTTGAGGGTCTGCTGA Protein sequence : MHLSQFLQETCHLTDEDLKKALKLQRDLGGELGRLLVQIGAMTESQRVEALSSYLDIPLYSGGGAMEDSLAAFLSNRLDY DFLLKNHFIPLAVDHERKLLEALTSDPFNSSMSDYVVKNLGYAVRLILAPEKTVDELARSYLDGQDREFVSLVVEEDAEK LKEMAFEAPVIKYLNSLLNKAVEMRASDIHIESSEKKYRVRFRIDGILHDIDTLEEAFYLATVSRIKLLAELDIAEKRLP QDGKFTTRIASLFLDIRVSTLPTINGEGVVLRLLYREKVSLDLDYLGLDADHKAVAVELISHPYGMILVTGPTGSGKSTT LYSMLTRLNHPDRKIITIEDPVEYQLQGINQIQVRGEIGLTFAAALRSILRHDPDIVMVGEIRDRETAEISIQSALTGHL VLSTLHTNDSPSSLFRLIEMGIEDYLLNAAIIGVMAQRIIRKNCPFCSRPDPAAEPPLREYGLHELAEKYAPLLEEGISL RRGEGCPQCGETGYRGRIAIFELFEYTDDLKEILLKKRSLEALRAALTERTSFRRLREDGILKVVRGETTLEEVLRVC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-83 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-83 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SYN_00458 | YP_462044.1 | general secretion pathway protein E | VFG0182 | Protein | 3e-89 | 49 |
| SYN_00458 | YP_462044.1 | general secretion pathway protein E | VFG1876 | Protein | 5e-85 | 46 |
| SYN_00458 | YP_462044.1 | general secretion pathway protein E | VFG2048 | Protein | 3e-84 | 45 |
| SYN_00458 | YP_462044.1 | general secretion pathway protein E | VFG2426 | Protein | 2e-72 | 44 |
| SYN_00458 | YP_462044.1 | general secretion pathway protein E | VFG1880 | Protein | 1e-73 | 44 |
| SYN_00458 | YP_462044.1 | general secretion pathway protein E | VFG0233 | Protein | 3e-70 | 43 |
